Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TnfP06804 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TnfP06804 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TnfP06804 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.86□□□□□ -0.03
TnfP06804 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TnfP06804 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TnfP06804 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TnfP06804 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TnfP06804 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.86□□□□□ -0.03
TnfP06804 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TnfP06804 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TnfP06804 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TnfP06804 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TnfP06804 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TnfP06804 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TnfP06804 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TnfP06804 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
TnfP06804 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TnfP06804 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TnfP06804 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.85□□□□□ -0.03
TnfP06804 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TnfP06804 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TnfP06804 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TnfP06804 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TnfP06804 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.85□□□□□ -0.03
TnfP06804 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TnfP06804 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.85□□□□□ -0.03
TnfP06804 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.85□□□□□ -0.03
TnfP06804 Gm43094-201ENSMUST00000196549 921 ntBASIC14.85□□□□□ -0.03
TnfP06804 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.85□□□□□ -0.03
TnfP06804 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TnfP06804 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.85□□□□□ -0.03
TnfP06804 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TnfP06804 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.85□□□□□ -0.03
TnfP06804 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TnfP06804 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.85□□□□□ -0.03
TnfP06804 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TnfP06804 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TnfP06804 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TnfP06804 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TnfP06804 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TnfP06804 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TnfP06804 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TnfP06804 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.85□□□□□ -0.03
TnfP06804 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TnfP06804 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TnfP06804 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TnfP06804 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TnfP06804 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TnfP06804 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TnfP06804 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TnfP06804 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TnfP06804 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TnfP06804 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TnfP06804 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TnfP06804 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.84□□□□□ -0.03
TnfP06804 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TnfP06804 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TnfP06804 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TnfP06804 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TnfP06804 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TnfP06804 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
TnfP06804 Gm11478-201ENSMUST00000117851 599 ntBASIC14.84□□□□□ -0.03
TnfP06804 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.84□□□□□ -0.03
TnfP06804 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
TnfP06804 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TnfP06804 Mir7654-201ENSMUST00000185082 70 ntBASIC14.84□□□□□ -0.03
TnfP06804 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
TnfP06804 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.84□□□□□ -0.03
TnfP06804 Gm18307-201ENSMUST00000206864 949 ntBASIC14.84□□□□□ -0.03
TnfP06804 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TnfP06804 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.84□□□□□ -0.03
TnfP06804 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TnfP06804 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
TnfP06804 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TnfP06804 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TnfP06804 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TnfP06804 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TnfP06804 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TnfP06804 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TnfP06804 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TnfP06804 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TnfP06804 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
TnfP06804 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
TnfP06804 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.83□□□□□ -0.04
TnfP06804 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TnfP06804 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TnfP06804 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TnfP06804 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TnfP06804 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TnfP06804 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TnfP06804 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.83□□□□□ -0.04
TnfP06804 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TnfP06804 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TnfP06804 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TnfP06804 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
TnfP06804 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.83□□□□□ -0.04
TnfP06804 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.83□□□□□ -0.04
TnfP06804 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TnfP06804 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms