Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
P06344 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06344 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
P06344 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.5□□□□□ -0.41
P06344 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P06344 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P06344 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.5□□□□□ -0.41
P06344 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P06344 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.5□□□□□ -0.41
P06344 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P06344 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P06344 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P06344 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P06344 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P06344 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P06344 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
P06344 Gm15393-201ENSMUST00000120499 219 ntBASIC12.5□□□□□ -0.41
P06344 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.5□□□□□ -0.41
P06344 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.5□□□□□ -0.41
P06344 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P06344 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
P06344 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
P06344 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.5□□□□□ -0.41
P06344 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P06344 Syt7-205ENSMUST00000224135 1557 ntBASIC12.5□□□□□ -0.41
P06344 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
P06344 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
P06344 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P06344 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
P06344 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P06344 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
P06344 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P06344 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P06344 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P06344 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P06344 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P06344 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P06344 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
P06344 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
P06344 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P06344 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P06344 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P06344 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.49□□□□□ -0.41
P06344 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P06344 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
P06344 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
P06344 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.49□□□□□ -0.41
P06344 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.49□□□□□ -0.41
P06344 Gm44608-201ENSMUST00000206827 855 ntBASIC12.49□□□□□ -0.41
P06344 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P06344 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
P06344 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
P06344 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P06344 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P06344 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
P06344 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.49□□□□□ -0.41
P06344 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P06344 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P06344 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
P06344 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
P06344 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
P06344 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
P06344 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P06344 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P06344 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.49□□□□□ -0.41
P06344 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.49□□□□□ -0.41
P06344 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P06344 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
P06344 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
P06344 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
P06344 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.49□□□□□ -0.41
P06344 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P06344 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
P06344 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
P06344 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P06344 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P06344 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
P06344 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P06344 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.48□□□□□ -0.41
P06344 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
P06344 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.48□□□□□ -0.41
P06344 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.48□□□□□ -0.41
P06344 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
P06344 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
P06344 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
P06344 Gm12585-201ENSMUST00000117307 290 ntBASIC12.48□□□□□ -0.41
P06344 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.48□□□□□ -0.41
P06344 Gm9522-201ENSMUST00000182394 926 ntBASIC12.48□□□□□ -0.41
P06344 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.48□□□□□ -0.41
P06344 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.48□□□□□ -0.41
P06344 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P06344 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
P06344 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
P06344 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P06344 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
P06344 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
P06344 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
P06344 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P06344 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
P06344 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms