Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt1P04104 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.24□□□□□ -0.29
Krt1P04104 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Krt1P04104 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Krt1P04104 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Krt1P04104 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Krt1P04104 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Krt1P04104 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.24□□□□□ -0.29
Krt1P04104 Gm27742-201ENSMUST00000184667 60 ntBASIC13.24□□□□□ -0.29
Krt1P04104 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Krt1P04104 Gm7787-201ENSMUST00000216858 688 ntBASIC13.24□□□□□ -0.29
Krt1P04104 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Krt1P04104 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt1P04104 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.24□□□□□ -0.29
Krt1P04104 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt1P04104 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Krt1P04104 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt1P04104 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Krt1P04104 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt1P04104 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt1P04104 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Krt1P04104 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt1P04104 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Krt1P04104 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Krt1P04104 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt1P04104 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt1P04104 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt1P04104 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt1P04104 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Krt1P04104 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt1P04104 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt1P04104 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt1P04104 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt1P04104 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Krt1P04104 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt1P04104 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt1P04104 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Krt1P04104 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.23□□□□□ -0.29
Krt1P04104 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Krt1P04104 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Krt1P04104 Mir6982-201ENSMUST00000184354 68 ntBASIC13.23□□□□□ -0.29
Krt1P04104 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Krt1P04104 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt1P04104 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Krt1P04104 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt1P04104 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt1P04104 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt1P04104 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt1P04104 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.23□□□□□ -0.29
Krt1P04104 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt1P04104 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt1P04104 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Krt1P04104 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Krt1P04104 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt1P04104 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Krt1P04104 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Krt1P04104 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt1P04104 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.23□□□□□ -0.29
Krt1P04104 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt1P04104 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt1P04104 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt1P04104 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt1P04104 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt1P04104 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Krt1P04104 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt1P04104 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt1P04104 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.22□□□□□ -0.29
Krt1P04104 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt1P04104 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt1P04104 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.22□□□□□ -0.29
Krt1P04104 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Krt1P04104 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt1P04104 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt1P04104 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Krt1P04104 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.22□□□□□ -0.29
Krt1P04104 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.22□□□□□ -0.29
Krt1P04104 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.22□□□□□ -0.29
Krt1P04104 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt1P04104 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt1P04104 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt1P04104 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Krt1P04104 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt1P04104 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt1P04104 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt1P04104 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Krt1P04104 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt1P04104 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Krt1P04104 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Krt1P04104 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt1P04104 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Krt1P04104 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt1P04104 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt1P04104 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt1P04104 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt1P04104 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.22□□□□□ -0.29
Krt1P04104 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
Krt1P04104 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt1P04104 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.21□□□□□ -0.29
Krt1P04104 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Krt1P04104 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms