Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ttc3O88196 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ttc3O88196 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
Ttc3O88196 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Ttc3O88196 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ttc3O88196 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ttc3O88196 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ttc3O88196 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ttc3O88196 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Ttc3O88196 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ttc3O88196 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ttc3O88196 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
Ttc3O88196 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ttc3O88196 Gm14660-201ENSMUST00000119809 575 ntBASIC14.58□□□□□ -0.07
Ttc3O88196 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.58□□□□□ -0.07
Ttc3O88196 Mir1982-201ENSMUST00000157368 74 ntBASIC14.58□□□□□ -0.07
Ttc3O88196 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ttc3O88196 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.58□□□□□ -0.07
Ttc3O88196 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.58□□□□□ -0.07
Ttc3O88196 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Ttc3O88196 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.07
Ttc3O88196 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
Ttc3O88196 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ttc3O88196 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.58□□□□□ -0.08
Ttc3O88196 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ttc3O88196 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Ttc3O88196 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ttc3O88196 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ttc3O88196 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ttc3O88196 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ttc3O88196 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ttc3O88196 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ttc3O88196 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Ttc3O88196 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.58□□□□□ -0.08
Ttc3O88196 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ttc3O88196 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ttc3O88196 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ttc3O88196 Gm29608-201ENSMUST00000190444 463 ntBASIC14.58□□□□□ -0.08
Ttc3O88196 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ttc3O88196 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ttc3O88196 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Ttc3O88196 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ttc3O88196 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ttc3O88196 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ttc3O88196 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.57□□□□□ -0.08
Ttc3O88196 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ttc3O88196 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ttc3O88196 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ttc3O88196 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ttc3O88196 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ttc3O88196 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Ttc3O88196 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ttc3O88196 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.57□□□□□ -0.08
Ttc3O88196 Gm6007-201ENSMUST00000208170 823 ntBASIC14.57□□□□□ -0.08
Ttc3O88196 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.57□□□□□ -0.08
Ttc3O88196 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ttc3O88196 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ttc3O88196 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ttc3O88196 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ttc3O88196 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ttc3O88196 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ttc3O88196 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ttc3O88196 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ttc3O88196 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ttc3O88196 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.57□□□□□ -0.08
Ttc3O88196 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ttc3O88196 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ttc3O88196 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Ttc3O88196 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.56□□□□□ -0.08
Ttc3O88196 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc3O88196 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc3O88196 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.56□□□□□ -0.08
Ttc3O88196 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc3O88196 Snora78-201ENSMUST00000158630 128 ntBASIC14.56□□□□□ -0.08
Ttc3O88196 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.56□□□□□ -0.08
Ttc3O88196 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.56□□□□□ -0.08
Ttc3O88196 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc3O88196 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc3O88196 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ttc3O88196 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc3O88196 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc3O88196 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ttc3O88196 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc3O88196 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc3O88196 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc3O88196 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc3O88196 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc3O88196 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc3O88196 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.56□□□□□ -0.08
Ttc3O88196 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc3O88196 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc3O88196 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc3O88196 Gm13612-201ENSMUST00000119276 390 ntBASIC14.56□□□□□ -0.08
Ttc3O88196 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc3O88196 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc3O88196 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc3O88196 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Ttc3O88196 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc3O88196 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc3O88196 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms