Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.72□□□□□ -0.37
Rnf13O54965 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.72□□□□□ -0.37
Rnf13O54965 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rnf13O54965 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf13O54965 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.72□□□□□ -0.37
Rnf13O54965 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.72□□□□□ -0.37
Rnf13O54965 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf13O54965 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf13O54965 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf13O54965 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf13O54965 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf13O54965 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.72□□□□□ -0.37
Rnf13O54965 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf13O54965 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf13O54965 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf13O54965 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf13O54965 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf13O54965 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf13O54965 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf13O54965 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf13O54965 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf13O54965 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf13O54965 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Rnf13O54965 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf13O54965 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.71□□□□□ -0.37
Rnf13O54965 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.71□□□□□ -0.37
Rnf13O54965 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Rnf13O54965 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf13O54965 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf13O54965 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf13O54965 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.71□□□□□ -0.38
Rnf13O54965 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Rnf13O54965 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Rnf13O54965 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf13O54965 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf13O54965 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf13O54965 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.71□□□□□ -0.38
Rnf13O54965 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf13O54965 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Rnf13O54965 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Rnf13O54965 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf13O54965 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.7□□□□□ -0.38
Rnf13O54965 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rnf13O54965 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf13O54965 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.7□□□□□ -0.38
Rnf13O54965 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf13O54965 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf13O54965 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf13O54965 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf13O54965 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rnf13O54965 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf13O54965 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.7□□□□□ -0.38
Rnf13O54965 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf13O54965 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.7□□□□□ -0.38
Rnf13O54965 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf13O54965 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.7□□□□□ -0.38
Rnf13O54965 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.7□□□□□ -0.38
Rnf13O54965 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Rnf13O54965 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf13O54965 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf13O54965 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf13O54965 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf13O54965 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf13O54965 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Rnf13O54965 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Rnf13O54965 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf13O54965 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Rnf13O54965 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf13O54965 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf13O54965 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Rnf13O54965 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf13O54965 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf13O54965 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf13O54965 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf13O54965 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rnf13O54965 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf13O54965 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf13O54965 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf13O54965 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.7□□□□□ -0.38
Rnf13O54965 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf13O54965 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf13O54965 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf13O54965 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.69□□□□□ -0.38
Rnf13O54965 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf13O54965 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf13O54965 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf13O54965 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf13O54965 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf13O54965 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Rnf13O54965 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rnf13O54965 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf13O54965 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf13O54965 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf13O54965 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf13O54965 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rnf13O54965 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf13O54965 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf13O54965 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf13O54965 Gm27920-201ENSMUST00000183953 96 ntBASIC12.69□□□□□ -0.38
Rnf13O54965 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms