Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.66■□□□□ 0.26
Smarce1O54941 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smarce1O54941 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Smarce1O54941 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarce1O54941 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Smarce1O54941 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarce1O54941 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarce1O54941 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.66■□□□□ 0.26
Smarce1O54941 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarce1O54941 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.66■□□□□ 0.26
Smarce1O54941 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smarce1O54941 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Smarce1O54941 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.66■□□□□ 0.26
Smarce1O54941 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarce1O54941 Gm2445-201ENSMUST00000182798 989 ntBASIC16.66■□□□□ 0.26
Smarce1O54941 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.66■□□□□ 0.26
Smarce1O54941 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Smarce1O54941 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Smarce1O54941 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.66■□□□□ 0.26
Smarce1O54941 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Smarce1O54941 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Smarce1O54941 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Smarce1O54941 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarce1O54941 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Smarce1O54941 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Smarce1O54941 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.66■□□□□ 0.26
Smarce1O54941 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarce1O54941 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarce1O54941 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Smarce1O54941 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarce1O54941 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarce1O54941 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC16.65■□□□□ 0.26
Smarce1O54941 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Smarce1O54941 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smarce1O54941 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarce1O54941 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarce1O54941 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Smarce1O54941 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
Smarce1O54941 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.65■□□□□ 0.26
Smarce1O54941 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.65■□□□□ 0.26
Smarce1O54941 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.65■□□□□ 0.26
Smarce1O54941 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.65■□□□□ 0.26
Smarce1O54941 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarce1O54941 Il17rd-203ENSMUST00000225146 3366 ntBASIC16.65■□□□□ 0.26
Smarce1O54941 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarce1O54941 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarce1O54941 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarce1O54941 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarce1O54941 Matn2-206ENSMUST00000228570 2798 ntBASIC16.65■□□□□ 0.26
Smarce1O54941 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smarce1O54941 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarce1O54941 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Smarce1O54941 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Smarce1O54941 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarce1O54941 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Smarce1O54941 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Smarce1O54941 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarce1O54941 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.64■□□□□ 0.25
Smarce1O54941 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarce1O54941 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarce1O54941 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarce1O54941 AA543401-201ENSMUST00000164248 1269 ntBASIC16.64■□□□□ 0.25
Smarce1O54941 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.64■□□□□ 0.25
Smarce1O54941 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.64■□□□□ 0.25
Smarce1O54941 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarce1O54941 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarce1O54941 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarce1O54941 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarce1O54941 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarce1O54941 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarce1O54941 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Smarce1O54941 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarce1O54941 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarce1O54941 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarce1O54941 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16.64■□□□□ 0.25
Smarce1O54941 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarce1O54941 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarce1O54941 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Smarce1O54941 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smarce1O54941 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Smarce1O54941 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarce1O54941 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Smarce1O54941 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarce1O54941 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarce1O54941 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Smarce1O54941 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smarce1O54941 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.63■□□□□ 0.25
Smarce1O54941 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.63■□□□□ 0.25
Smarce1O54941 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Smarce1O54941 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.63■□□□□ 0.25
Smarce1O54941 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Smarce1O54941 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.63■□□□□ 0.25
Smarce1O54941 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarce1O54941 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarce1O54941 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarce1O54941 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smarce1O54941 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarce1O54941 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarce1O54941 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarce1O54941 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms