Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.74□□□□□ -0.37
Matn3O35701 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Matn3O35701 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Matn3O35701 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.74□□□□□ -0.37
Matn3O35701 Gm7862-201ENSMUST00000121461 292 ntBASIC12.74□□□□□ -0.37
Matn3O35701 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.74□□□□□ -0.37
Matn3O35701 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Matn3O35701 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.74□□□□□ -0.37
Matn3O35701 Gm2651-201ENSMUST00000203560 838 ntBASIC12.74□□□□□ -0.37
Matn3O35701 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Matn3O35701 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Matn3O35701 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Matn3O35701 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Matn3O35701 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Matn3O35701 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Matn3O35701 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Matn3O35701 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.74□□□□□ -0.37
Matn3O35701 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.74□□□□□ -0.37
Matn3O35701 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Matn3O35701 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.74□□□□□ -0.37
Matn3O35701 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Matn3O35701 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Matn3O35701 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Matn3O35701 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Matn3O35701 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Matn3O35701 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Matn3O35701 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.74□□□□□ -0.37
Matn3O35701 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.73□□□□□ -0.37
Matn3O35701 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Matn3O35701 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Matn3O35701 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Matn3O35701 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Matn3O35701 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Matn3O35701 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Matn3O35701 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Matn3O35701 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Matn3O35701 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Matn3O35701 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Matn3O35701 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Matn3O35701 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.73□□□□□ -0.37
Matn3O35701 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Matn3O35701 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Matn3O35701 Gm18206-201ENSMUST00000207027 926 ntBASIC12.73□□□□□ -0.37
Matn3O35701 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.73□□□□□ -0.37
Matn3O35701 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.73□□□□□ -0.37
Matn3O35701 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Matn3O35701 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Matn3O35701 Gm5867-201ENSMUST00000063197 592 ntBASIC12.73□□□□□ -0.37
Matn3O35701 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Matn3O35701 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Matn3O35701 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Matn3O35701 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Matn3O35701 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Matn3O35701 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Matn3O35701 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.73□□□□□ -0.37
Matn3O35701 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
Matn3O35701 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Matn3O35701 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Matn3O35701 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Matn3O35701 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Matn3O35701 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Matn3O35701 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Matn3O35701 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Matn3O35701 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Matn3O35701 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.72□□□□□ -0.37
Matn3O35701 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Matn3O35701 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Matn3O35701 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Matn3O35701 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Matn3O35701 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Matn3O35701 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Matn3O35701 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Matn3O35701 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.72□□□□□ -0.37
Matn3O35701 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.72□□□□□ -0.37
Matn3O35701 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Matn3O35701 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Matn3O35701 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Matn3O35701 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Matn3O35701 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Matn3O35701 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Matn3O35701 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.72□□□□□ -0.37
Matn3O35701 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.72□□□□□ -0.37
Matn3O35701 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.72□□□□□ -0.37
Matn3O35701 Gm9682-201ENSMUST00000197505 556 ntBASIC12.72□□□□□ -0.37
Matn3O35701 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.72□□□□□ -0.37
Matn3O35701 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Matn3O35701 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Matn3O35701 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Matn3O35701 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Matn3O35701 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Matn3O35701 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
Matn3O35701 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Matn3O35701 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Matn3O35701 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.72□□□□□ -0.37
Matn3O35701 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Matn3O35701 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Matn3O35701 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Matn3O35701 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Matn3O35701 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Matn3O35701 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms