Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Npc1O35604 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Npc1O35604 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Npc1O35604 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Npc1O35604 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Npc1O35604 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Npc1O35604 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Npc1O35604 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Npc1O35604 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.7□□□□□ -0.22
Npc1O35604 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Npc1O35604 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Npc1O35604 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Npc1O35604 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Npc1O35604 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Npc1O35604 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.7□□□□□ -0.22
Npc1O35604 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Npc1O35604 Gm14719-201ENSMUST00000121891 340 ntBASIC13.7□□□□□ -0.22
Npc1O35604 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Npc1O35604 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.7□□□□□ -0.22
Npc1O35604 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.7□□□□□ -0.22
Npc1O35604 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.7□□□□□ -0.22
Npc1O35604 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.7□□□□□ -0.22
Npc1O35604 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Npc1O35604 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Npc1O35604 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Npc1O35604 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.7□□□□□ -0.22
Npc1O35604 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Npc1O35604 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Npc1O35604 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Npc1O35604 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Npc1O35604 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Npc1O35604 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Npc1O35604 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.69□□□□□ -0.22
Npc1O35604 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npc1O35604 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npc1O35604 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npc1O35604 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.69□□□□□ -0.22
Npc1O35604 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Npc1O35604 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npc1O35604 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npc1O35604 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Npc1O35604 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npc1O35604 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npc1O35604 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.69□□□□□ -0.22
Npc1O35604 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npc1O35604 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Npc1O35604 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.69□□□□□ -0.22
Npc1O35604 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Npc1O35604 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Npc1O35604 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npc1O35604 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npc1O35604 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npc1O35604 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Npc1O35604 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Npc1O35604 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Npc1O35604 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npc1O35604 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npc1O35604 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Npc1O35604 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Npc1O35604 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npc1O35604 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npc1O35604 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Npc1O35604 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Npc1O35604 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npc1O35604 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npc1O35604 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Npc1O35604 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npc1O35604 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npc1O35604 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npc1O35604 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npc1O35604 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npc1O35604 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Npc1O35604 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npc1O35604 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Npc1O35604 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npc1O35604 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Npc1O35604 Gm12585-201ENSMUST00000117307 290 ntBASIC13.68□□□□□ -0.22
Npc1O35604 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.68□□□□□ -0.22
Npc1O35604 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.68□□□□□ -0.22
Npc1O35604 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npc1O35604 Gm24694-201ENSMUST00000180054 110 ntBASIC13.68□□□□□ -0.22
Npc1O35604 Gm27663-201ENSMUST00000184839 110 ntBASIC13.68□□□□□ -0.22
Npc1O35604 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.68□□□□□ -0.22
Npc1O35604 Gm33320-201ENSMUST00000192232 530 ntBASIC13.68□□□□□ -0.22
Npc1O35604 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npc1O35604 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npc1O35604 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Npc1O35604 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Npc1O35604 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Npc1O35604 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Npc1O35604 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.68□□□□□ -0.22
Npc1O35604 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npc1O35604 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npc1O35604 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npc1O35604 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.68□□□□□ -0.22
Npc1O35604 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npc1O35604 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npc1O35604 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.68□□□□□ -0.22
Npc1O35604 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npc1O35604 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms