Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Gm8410-201ENSMUST00000117225 605 ntBASIC12.22□□□□□ -0.45
Atf6bO35451 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.22□□□□□ -0.45
Atf6bO35451 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6bO35451 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6bO35451 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Atf6bO35451 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6bO35451 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6bO35451 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Atf6bO35451 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.22□□□□□ -0.45
Atf6bO35451 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6bO35451 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6bO35451 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6bO35451 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6bO35451 Acot6-202ENSMUST00000222921 3622 ntBASIC12.22□□□□□ -0.45
Atf6bO35451 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6bO35451 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6bO35451 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6bO35451 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6bO35451 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6bO35451 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6bO35451 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6bO35451 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atf6bO35451 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Atf6bO35451 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Atf6bO35451 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atf6bO35451 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atf6bO35451 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Atf6bO35451 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atf6bO35451 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atf6bO35451 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atf6bO35451 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atf6bO35451 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atf6bO35451 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.21□□□□□ -0.45
Atf6bO35451 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atf6bO35451 Gm14042-201ENSMUST00000120139 833 ntBASIC12.21□□□□□ -0.45
Atf6bO35451 Gm6222-201ENSMUST00000120787 396 ntBASIC12.21□□□□□ -0.45
Atf6bO35451 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atf6bO35451 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.21□□□□□ -0.45
Atf6bO35451 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Atf6bO35451 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Atf6bO35451 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Atf6bO35451 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atf6bO35451 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atf6bO35451 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atf6bO35451 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Atf6bO35451 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Atf6bO35451 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Atf6bO35451 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Atf6bO35451 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Atf6bO35451 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Atf6bO35451 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Atf6bO35451 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Atf6bO35451 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Atf6bO35451 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Atf6bO35451 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.2□□□□□ -0.46
Atf6bO35451 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6bO35451 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Atf6bO35451 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6bO35451 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6bO35451 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Atf6bO35451 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.2□□□□□ -0.46
Atf6bO35451 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6bO35451 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6bO35451 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6bO35451 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Atf6bO35451 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Atf6bO35451 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6bO35451 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6bO35451 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6bO35451 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Atf6bO35451 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6bO35451 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.2□□□□□ -0.46
Atf6bO35451 Gm9719-201ENSMUST00000162765 543 ntBASIC12.2□□□□□ -0.46
Atf6bO35451 AA543401-201ENSMUST00000164248 1269 ntBASIC12.2□□□□□ -0.46
Atf6bO35451 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.2□□□□□ -0.46
Atf6bO35451 Gm28630-201ENSMUST00000187806 498 ntBASIC12.2□□□□□ -0.46
Atf6bO35451 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.2□□□□□ -0.46
Atf6bO35451 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6bO35451 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6bO35451 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Atf6bO35451 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6bO35451 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6bO35451 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6bO35451 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6bO35451 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6bO35451 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6bO35451 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6bO35451 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6bO35451 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6bO35451 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Atf6bO35451 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6bO35451 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6bO35451 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.2□□□□□ -0.46
Atf6bO35451 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6bO35451 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Atf6bO35451 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6bO35451 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atf6bO35451 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6bO35451 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Atf6bO35451 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms