Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Efnb3O35393 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Efnb3O35393 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Efnb3O35393 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Efnb3O35393 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Efnb3O35393 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Efnb3O35393 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Efnb3O35393 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.1□□□□□ -0.63
Efnb3O35393 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Efnb3O35393 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Efnb3O35393 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Efnb3O35393 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Efnb3O35393 Gm11873-201ENSMUST00000117877 1304 ntBASIC11.09□□□□□ -0.63
Efnb3O35393 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Efnb3O35393 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Efnb3O35393 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Efnb3O35393 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Efnb3O35393 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Efnb3O35393 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Efnb3O35393 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Efnb3O35393 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Efnb3O35393 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Efnb3O35393 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Efnb3O35393 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Efnb3O35393 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Efnb3O35393 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Efnb3O35393 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Efnb3O35393 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Efnb3O35393 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Efnb3O35393 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Efnb3O35393 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Efnb3O35393 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Efnb3O35393 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Efnb3O35393 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Efnb3O35393 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.09□□□□□ -0.63
Efnb3O35393 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Efnb3O35393 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC11.09□□□□□ -0.63
Efnb3O35393 Gm10275-202ENSMUST00000168697 495 ntBASIC11.09□□□□□ -0.63
Efnb3O35393 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC11.09□□□□□ -0.63
Efnb3O35393 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC11.09□□□□□ -0.63
Efnb3O35393 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Efnb3O35393 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC11.09□□□□□ -0.63
Efnb3O35393 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.09□□□□□ -0.63
Efnb3O35393 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.09□□□□□ -0.63
Efnb3O35393 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Efnb3O35393 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Efnb3O35393 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Efnb3O35393 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Efnb3O35393 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.09□□□□□ -0.63
Efnb3O35393 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC11.09□□□□□ -0.63
Efnb3O35393 Gm10275-201ENSMUST00000092620 635 ntBASIC11.09□□□□□ -0.63
Efnb3O35393 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Efnb3O35393 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Efnb3O35393 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.09□□□□□ -0.63
Efnb3O35393 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Efnb3O35393 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Efnb3O35393 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Efnb3O35393 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Efnb3O35393 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Efnb3O35393 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Efnb3O35393 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.09□□□□□ -0.63
Efnb3O35393 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Efnb3O35393 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Efnb3O35393 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.09□□□□□ -0.63
Efnb3O35393 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.09□□□□□ -0.63
Efnb3O35393 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.09□□□□□ -0.63
Efnb3O35393 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Efnb3O35393 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Efnb3O35393 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Efnb3O35393 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Efnb3O35393 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
Efnb3O35393 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.08□□□□□ -0.64
Efnb3O35393 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Efnb3O35393 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Efnb3O35393 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Efnb3O35393 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Efnb3O35393 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Efnb3O35393 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.64
Efnb3O35393 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Efnb3O35393 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Efnb3O35393 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Efnb3O35393 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Efnb3O35393 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Efnb3O35393 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.08□□□□□ -0.64
Efnb3O35393 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Efnb3O35393 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Efnb3O35393 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Efnb3O35393 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Efnb3O35393 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Efnb3O35393 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Efnb3O35393 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC11.08□□□□□ -0.64
Efnb3O35393 Gm1401-201ENSMUST00000122048 772 ntBASIC11.08□□□□□ -0.64
Efnb3O35393 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Efnb3O35393 Gm27628-201ENSMUST00000184911 107 ntBASIC11.08□□□□□ -0.64
Efnb3O35393 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC11.08□□□□□ -0.64
Efnb3O35393 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.08□□□□□ -0.64
Efnb3O35393 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Efnb3O35393 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC11.08□□□□□ -0.64
Efnb3O35393 Gm10154-201ENSMUST00000084445 354 ntBASIC11.08□□□□□ -0.64
Efnb3O35393 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms