Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Trove2O08848 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trove2O08848 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trove2O08848 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.41□□□□□ -0.1
Trove2O08848 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.41□□□□□ -0.1
Trove2O08848 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trove2O08848 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trove2O08848 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trove2O08848 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trove2O08848 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trove2O08848 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trove2O08848 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trove2O08848 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trove2O08848 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trove2O08848 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trove2O08848 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trove2O08848 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trove2O08848 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trove2O08848 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trove2O08848 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trove2O08848 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trove2O08848 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.4□□□□□ -0.1
Trove2O08848 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Trove2O08848 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trove2O08848 Gm1401-201ENSMUST00000122048 772 ntBASIC14.4□□□□□ -0.1
Trove2O08848 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.4□□□□□ -0.1
Trove2O08848 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trove2O08848 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.4□□□□□ -0.1
Trove2O08848 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trove2O08848 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.4□□□□□ -0.1
Trove2O08848 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trove2O08848 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trove2O08848 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trove2O08848 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trove2O08848 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trove2O08848 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trove2O08848 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trove2O08848 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trove2O08848 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trove2O08848 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trove2O08848 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.4□□□□□ -0.1
Trove2O08848 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.4□□□□□ -0.1
Trove2O08848 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trove2O08848 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.11
Trove2O08848 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Trove2O08848 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trove2O08848 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trove2O08848 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trove2O08848 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trove2O08848 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trove2O08848 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trove2O08848 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.39□□□□□ -0.11
Trove2O08848 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trove2O08848 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trove2O08848 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trove2O08848 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trove2O08848 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trove2O08848 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trove2O08848 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.39□□□□□ -0.11
Trove2O08848 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trove2O08848 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.39□□□□□ -0.11
Trove2O08848 Gm13597-201ENSMUST00000121239 375 ntBASIC14.39□□□□□ -0.11
Trove2O08848 Gm2272-201ENSMUST00000194903 582 ntBASIC14.39□□□□□ -0.11
Trove2O08848 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.39□□□□□ -0.11
Trove2O08848 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trove2O08848 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trove2O08848 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trove2O08848 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trove2O08848 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trove2O08848 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trove2O08848 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trove2O08848 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trove2O08848 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trove2O08848 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trove2O08848 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trove2O08848 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trove2O08848 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trove2O08848 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trove2O08848 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trove2O08848 Grk6-205ENSMUST00000224653 2976 ntBASIC14.38□□□□□ -0.11
Trove2O08848 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trove2O08848 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trove2O08848 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trove2O08848 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trove2O08848 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trove2O08848 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trove2O08848 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.38□□□□□ -0.11
Trove2O08848 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trove2O08848 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.38□□□□□ -0.11
Trove2O08848 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trove2O08848 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trove2O08848 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trove2O08848 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.38□□□□□ -0.11
Trove2O08848 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trove2O08848 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trove2O08848 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trove2O08848 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trove2O08848 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trove2O08848 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trove2O08848 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms