Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim55G3X8Y1 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.4□□□□□ -0.1
Trim55G3X8Y1 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim55G3X8Y1 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trim55G3X8Y1 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim55G3X8Y1 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim55G3X8Y1 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim55G3X8Y1 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trim55G3X8Y1 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trim55G3X8Y1 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim55G3X8Y1 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim55G3X8Y1 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim55G3X8Y1 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
Trim55G3X8Y1 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim55G3X8Y1 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trim55G3X8Y1 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim55G3X8Y1 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.39□□□□□ -0.11
Trim55G3X8Y1 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trim55G3X8Y1 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim55G3X8Y1 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Trim55G3X8Y1 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Trim55G3X8Y1 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim55G3X8Y1 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim55G3X8Y1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim55G3X8Y1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim55G3X8Y1 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.39□□□□□ -0.11
Trim55G3X8Y1 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.39□□□□□ -0.11
Trim55G3X8Y1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim55G3X8Y1 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trim55G3X8Y1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim55G3X8Y1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim55G3X8Y1 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trim55G3X8Y1 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim55G3X8Y1 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim55G3X8Y1 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trim55G3X8Y1 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim55G3X8Y1 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim55G3X8Y1 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim55G3X8Y1 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim55G3X8Y1 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim55G3X8Y1 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim55G3X8Y1 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim55G3X8Y1 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim55G3X8Y1 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim55G3X8Y1 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim55G3X8Y1 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim55G3X8Y1 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim55G3X8Y1 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Trim55G3X8Y1 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim55G3X8Y1 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim55G3X8Y1 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim55G3X8Y1 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim55G3X8Y1 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim55G3X8Y1 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim55G3X8Y1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.38□□□□□ -0.11
Trim55G3X8Y1 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim55G3X8Y1 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.38□□□□□ -0.11
Trim55G3X8Y1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim55G3X8Y1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim55G3X8Y1 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim55G3X8Y1 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim55G3X8Y1 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim55G3X8Y1 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim55G3X8Y1 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim55G3X8Y1 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim55G3X8Y1 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim55G3X8Y1 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim55G3X8Y1 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trim55G3X8Y1 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim55G3X8Y1 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim55G3X8Y1 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
Trim55G3X8Y1 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim55G3X8Y1 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim55G3X8Y1 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim55G3X8Y1 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Trim55G3X8Y1 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim55G3X8Y1 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim55G3X8Y1 Grk6-207ENSMUST00000225925 2769 ntBASIC14.37□□□□□ -0.11
Trim55G3X8Y1 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trim55G3X8Y1 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim55G3X8Y1 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim55G3X8Y1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trim55G3X8Y1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.37□□□□□ -0.11
Trim55G3X8Y1 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.37□□□□□ -0.11
Trim55G3X8Y1 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.37□□□□□ -0.11
Trim55G3X8Y1 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.37□□□□□ -0.11
Trim55G3X8Y1 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.37□□□□□ -0.11
Trim55G3X8Y1 Gm17808-201ENSMUST00000200859 894 ntBASIC14.37□□□□□ -0.11
Trim55G3X8Y1 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim55G3X8Y1 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim55G3X8Y1 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.37□□□□□ -0.11
Trim55G3X8Y1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim55G3X8Y1 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim55G3X8Y1 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim55G3X8Y1 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Trim55G3X8Y1 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trim55G3X8Y1 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim55G3X8Y1 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim55G3X8Y1 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim55G3X8Y1 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms