Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 AC133598.1-201ENSMUST00000224327 660 ntBASIC16.82■□□□□ 0.28
NpcdF8VQB8 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NpcdF8VQB8 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.82■□□□□ 0.28
NpcdF8VQB8 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NpcdF8VQB8 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NpcdF8VQB8 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NpcdF8VQB8 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NpcdF8VQB8 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NpcdF8VQB8 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NpcdF8VQB8 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NpcdF8VQB8 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NpcdF8VQB8 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.81■□□□□ 0.28
NpcdF8VQB8 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NpcdF8VQB8 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NpcdF8VQB8 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NpcdF8VQB8 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NpcdF8VQB8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NpcdF8VQB8 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC16.81■□□□□ 0.28
NpcdF8VQB8 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC16.81■□□□□ 0.28
NpcdF8VQB8 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC16.81■□□□□ 0.28
NpcdF8VQB8 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NpcdF8VQB8 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NpcdF8VQB8 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NpcdF8VQB8 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NpcdF8VQB8 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NpcdF8VQB8 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.81■□□□□ 0.28
NpcdF8VQB8 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NpcdF8VQB8 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NpcdF8VQB8 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
NpcdF8VQB8 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.81■□□□□ 0.28
NpcdF8VQB8 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NpcdF8VQB8 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NpcdF8VQB8 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NpcdF8VQB8 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NpcdF8VQB8 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
NpcdF8VQB8 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NpcdF8VQB8 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
NpcdF8VQB8 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NpcdF8VQB8 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NpcdF8VQB8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NpcdF8VQB8 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.8■□□□□ 0.28
NpcdF8VQB8 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC16.8■□□□□ 0.28
NpcdF8VQB8 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC16.8■□□□□ 0.28
NpcdF8VQB8 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NpcdF8VQB8 Gm26083-201ENSMUST00000157904 193 ntBASIC16.8■□□□□ 0.28
NpcdF8VQB8 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NpcdF8VQB8 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NpcdF8VQB8 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NpcdF8VQB8 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NpcdF8VQB8 Gm43118-201ENSMUST00000199149 775 ntBASIC16.8■□□□□ 0.28
NpcdF8VQB8 Gm43758-201ENSMUST00000199500 367 ntBASIC16.8■□□□□ 0.28
NpcdF8VQB8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NpcdF8VQB8 Mettl6-204ENSMUST00000227595 1027 ntBASIC16.8■□□□□ 0.28
NpcdF8VQB8 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NpcdF8VQB8 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NpcdF8VQB8 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NpcdF8VQB8 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NpcdF8VQB8 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NpcdF8VQB8 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NpcdF8VQB8 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NpcdF8VQB8 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NpcdF8VQB8 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NpcdF8VQB8 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NpcdF8VQB8 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NpcdF8VQB8 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NpcdF8VQB8 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NpcdF8VQB8 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NpcdF8VQB8 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NpcdF8VQB8 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NpcdF8VQB8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NpcdF8VQB8 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NpcdF8VQB8 Gm13689-201ENSMUST00000119360 685 ntBASIC16.79■□□□□ 0.28
NpcdF8VQB8 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NpcdF8VQB8 Gm15376-201ENSMUST00000122258 783 ntBASIC16.79■□□□□ 0.28
NpcdF8VQB8 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC16.79■□□□□ 0.28
NpcdF8VQB8 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC16.79■□□□□ 0.28
NpcdF8VQB8 Gm9124-201ENSMUST00000191789 1092 ntBASIC16.79■□□□□ 0.28
NpcdF8VQB8 Gm9113-201ENSMUST00000192510 1018 ntBASIC16.79■□□□□ 0.28
NpcdF8VQB8 Gm9131-201ENSMUST00000193557 1089 ntBASIC16.79■□□□□ 0.28
NpcdF8VQB8 Gm9121-201ENSMUST00000193749 1071 ntBASIC16.79■□□□□ 0.28
NpcdF8VQB8 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NpcdF8VQB8 Gm17823-201ENSMUST00000217830 1006 ntBASIC16.79■□□□□ 0.28
NpcdF8VQB8 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NpcdF8VQB8 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NpcdF8VQB8 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NpcdF8VQB8 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NpcdF8VQB8 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NpcdF8VQB8 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NpcdF8VQB8 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NpcdF8VQB8 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
NpcdF8VQB8 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
NpcdF8VQB8 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.79■□□□□ 0.28
NpcdF8VQB8 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NpcdF8VQB8 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NpcdF8VQB8 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NpcdF8VQB8 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NpcdF8VQB8 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NpcdF8VQB8 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NpcdF8VQB8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NpcdF8VQB8 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms