Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Colca2F8VPY8 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Colca2F8VPY8 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Colca2F8VPY8 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Colca2F8VPY8 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Colca2F8VPY8 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Colca2F8VPY8 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Colca2F8VPY8 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Colca2F8VPY8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Colca2F8VPY8 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Colca2F8VPY8 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Colca2F8VPY8 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC13.15□□□□□ -0.3
Colca2F8VPY8 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Colca2F8VPY8 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Colca2F8VPY8 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Colca2F8VPY8 Gm13297-201ENSMUST00000120205 934 ntBASIC13.15□□□□□ -0.3
Colca2F8VPY8 Gm14381-201ENSMUST00000122105 414 ntBASIC13.15□□□□□ -0.3
Colca2F8VPY8 Gm2991-201ENSMUST00000173338 480 ntBASIC13.15□□□□□ -0.3
Colca2F8VPY8 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.15□□□□□ -0.3
Colca2F8VPY8 Gm6621-201ENSMUST00000193251 772 ntBASIC13.15□□□□□ -0.3
Colca2F8VPY8 Gm3786-201ENSMUST00000202659 378 ntBASIC13.15□□□□□ -0.3
Colca2F8VPY8 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Colca2F8VPY8 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Colca2F8VPY8 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Colca2F8VPY8 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.15□□□□□ -0.3
Colca2F8VPY8 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Colca2F8VPY8 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Colca2F8VPY8 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Colca2F8VPY8 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Colca2F8VPY8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Colca2F8VPY8 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.15□□□□□ -0.3
Colca2F8VPY8 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Colca2F8VPY8 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Colca2F8VPY8 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Colca2F8VPY8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Colca2F8VPY8 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Colca2F8VPY8 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Colca2F8VPY8 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Colca2F8VPY8 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Colca2F8VPY8 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.14□□□□□ -0.31
Colca2F8VPY8 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Colca2F8VPY8 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Colca2F8VPY8 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Colca2F8VPY8 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.14□□□□□ -0.31
Colca2F8VPY8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.14□□□□□ -0.31
Colca2F8VPY8 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Colca2F8VPY8 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Colca2F8VPY8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Colca2F8VPY8 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Colca2F8VPY8 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Colca2F8VPY8 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Colca2F8VPY8 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Colca2F8VPY8 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Colca2F8VPY8 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Colca2F8VPY8 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.14□□□□□ -0.31
Colca2F8VPY8 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Colca2F8VPY8 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Colca2F8VPY8 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Colca2F8VPY8 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Colca2F8VPY8 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC13.14□□□□□ -0.31
Colca2F8VPY8 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Colca2F8VPY8 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.14□□□□□ -0.31
Colca2F8VPY8 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.14□□□□□ -0.31
Colca2F8VPY8 Gm7046-201ENSMUST00000221351 977 ntBASIC13.14□□□□□ -0.31
Colca2F8VPY8 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Colca2F8VPY8 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Colca2F8VPY8 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Colca2F8VPY8 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Colca2F8VPY8 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Colca2F8VPY8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Colca2F8VPY8 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.14□□□□□ -0.31
Colca2F8VPY8 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Colca2F8VPY8 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Colca2F8VPY8 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Colca2F8VPY8 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Colca2F8VPY8 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Colca2F8VPY8 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Colca2F8VPY8 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Colca2F8VPY8 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Colca2F8VPY8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Colca2F8VPY8 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Colca2F8VPY8 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Colca2F8VPY8 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Colca2F8VPY8 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Colca2F8VPY8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Colca2F8VPY8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Colca2F8VPY8 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Colca2F8VPY8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
Colca2F8VPY8 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.13□□□□□ -0.31
Colca2F8VPY8 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Colca2F8VPY8 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Colca2F8VPY8 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Colca2F8VPY8 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Colca2F8VPY8 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Colca2F8VPY8 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Colca2F8VPY8 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Colca2F8VPY8 Gm15370-201ENSMUST00000117158 253 ntBASIC13.13□□□□□ -0.31
Colca2F8VPY8 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Colca2F8VPY8 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Colca2F8VPY8 Gm25668-201ENSMUST00000157700 129 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms