Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh1F7BJK1 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdh1F7BJK1 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Gm14140-201ENSMUST00000119999 995 ntBASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh1F7BJK1 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 Psmb5-202ENSMUST00000227257 622 ntBASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.61□□□□□ -0.39
Pcdh1F7BJK1 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Gm1401-201ENSMUST00000122048 772 ntBASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Gm44608-201ENSMUST00000206827 855 ntBASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms