Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4aE9Q735 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC16.76■□□□□ 0.27
Ube4aE9Q735 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC16.76■□□□□ 0.27
Ube4aE9Q735 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Ube4aE9Q735 Gm38671-201ENSMUST00000200573 130 ntBASIC16.76■□□□□ 0.27
Ube4aE9Q735 Gm42550-201ENSMUST00000201553 960 ntBASIC16.76■□□□□ 0.27
Ube4aE9Q735 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC16.76■□□□□ 0.27
Ube4aE9Q735 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC16.76■□□□□ 0.27
Ube4aE9Q735 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4aE9Q735 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4aE9Q735 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4aE9Q735 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4aE9Q735 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4aE9Q735 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Ube4aE9Q735 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4aE9Q735 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4aE9Q735 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4aE9Q735 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4aE9Q735 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ube4aE9Q735 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube4aE9Q735 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ube4aE9Q735 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube4aE9Q735 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ube4aE9Q735 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ube4aE9Q735 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Ube4aE9Q735 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube4aE9Q735 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ube4aE9Q735 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ube4aE9Q735 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.75■□□□□ 0.27
Ube4aE9Q735 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube4aE9Q735 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube4aE9Q735 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube4aE9Q735 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ube4aE9Q735 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube4aE9Q735 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ube4aE9Q735 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube4aE9Q735 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube4aE9Q735 Gm24196-201ENSMUST00000179161 110 ntBASIC16.75■□□□□ 0.27
Ube4aE9Q735 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC16.75■□□□□ 0.27
Ube4aE9Q735 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ube4aE9Q735 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube4aE9Q735 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Ube4aE9Q735 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ube4aE9Q735 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube4aE9Q735 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube4aE9Q735 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.75■□□□□ 0.27
Ube4aE9Q735 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube4aE9Q735 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube4aE9Q735 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.75■□□□□ 0.27
Ube4aE9Q735 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4aE9Q735 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4aE9Q735 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Ube4aE9Q735 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4aE9Q735 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ube4aE9Q735 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4aE9Q735 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ube4aE9Q735 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Ube4aE9Q735 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4aE9Q735 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4aE9Q735 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4aE9Q735 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4aE9Q735 Gm29649-201ENSMUST00000185649 419 ntBASIC16.74■□□□□ 0.27
Ube4aE9Q735 Gm29127-201ENSMUST00000188304 517 ntBASIC16.74■□□□□ 0.27
Ube4aE9Q735 Gm45784-201ENSMUST00000188360 142 ntBASIC16.74■□□□□ 0.27
Ube4aE9Q735 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC16.74■□□□□ 0.27
Ube4aE9Q735 Gm18473-201ENSMUST00000220543 868 ntBASIC16.74■□□□□ 0.27
Ube4aE9Q735 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4aE9Q735 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ube4aE9Q735 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4aE9Q735 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ube4aE9Q735 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4aE9Q735 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4aE9Q735 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ube4aE9Q735 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ube4aE9Q735 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4aE9Q735 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4aE9Q735 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4aE9Q735 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4aE9Q735 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ube4aE9Q735 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4aE9Q735 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4aE9Q735 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4aE9Q735 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4aE9Q735 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4aE9Q735 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4aE9Q735 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4aE9Q735 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4aE9Q735 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4aE9Q735 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4aE9Q735 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC16.73■□□□□ 0.27
Ube4aE9Q735 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC16.73■□□□□ 0.27
Ube4aE9Q735 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC16.73■□□□□ 0.27
Ube4aE9Q735 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4aE9Q735 Mir1938-201ENSMUST00000158746 100 ntBASIC16.73■□□□□ 0.27
Ube4aE9Q735 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4aE9Q735 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC16.73■□□□□ 0.27
Ube4aE9Q735 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4aE9Q735 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4aE9Q735 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ube4aE9Q735 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms