Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Herc1E9PZP8 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Gm43294-201ENSMUST00000202850 2490 ntBASIC7.62□□□□□ -1.19
Herc1E9PZP8 Gm43423-201ENSMUST00000198390 2094 ntBASIC7.62□□□□□ -1.19
Herc1E9PZP8 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Gm12684-201ENSMUST00000118675 999 ntBASIC7.62□□□□□ -1.19
Herc1E9PZP8 Gm18636-201ENSMUST00000218846 1066 ntBASIC7.62□□□□□ -1.19
Herc1E9PZP8 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC7.62□□□□□ -1.19
Herc1E9PZP8 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Rprl1-202ENSMUST00000198476 238 ntBASIC7.62□□□□□ -1.19
Herc1E9PZP8 Gm18059-201ENSMUST00000208073 580 ntBASIC7.62□□□□□ -1.19
Herc1E9PZP8 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Herc1E9PZP8 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Gm13700-201ENSMUST00000118624 1128 ntBASIC7.61□□□□□ -1.19
Herc1E9PZP8 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Ap3s1-202ENSMUST00000224622 978 ntBASIC7.61□□□□□ -1.19
Herc1E9PZP8 AC158388.3-202ENSMUST00000225517 775 ntBASIC7.61□□□□□ -1.19
Herc1E9PZP8 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Gm11941-201ENSMUST00000119904 610 ntBASIC7.61□□□□□ -1.19
Herc1E9PZP8 Gm26957-201ENSMUST00000182645 977 ntBASIC7.61□□□□□ -1.19
Herc1E9PZP8 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC7.61□□□□□ -1.19
Herc1E9PZP8 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC7.61□□□□□ -1.19
Herc1E9PZP8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Gm7722-201ENSMUST00000120646 741 ntBASIC7.61□□□□□ -1.19
Herc1E9PZP8 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Gm26989-201ENSMUST00000182608 749 ntBASIC7.61□□□□□ -1.19
Herc1E9PZP8 Gm8756-201ENSMUST00000183250 929 ntBASIC7.61□□□□□ -1.19
Herc1E9PZP8 Gm6644-201ENSMUST00000186507 951 ntBASIC7.61□□□□□ -1.19
Herc1E9PZP8 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Herc1E9PZP8 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
Herc1E9PZP8 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Herc1E9PZP8 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Herc1E9PZP8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Herc1E9PZP8 Gm43338-201ENSMUST00000198617 2223 ntBASIC7.6□□□□□ -1.19
Herc1E9PZP8 Gm26596-201ENSMUST00000180464 2655 ntBASIC7.6□□□□□ -1.19
Herc1E9PZP8 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms