Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm3543D3Z235 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Gm3543D3Z235 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm3543D3Z235 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Gm3543D3Z235 Gm6222-201ENSMUST00000120787 396 ntBASIC12.72□□□□□ -0.37
Gm3543D3Z235 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.72□□□□□ -0.37
Gm3543D3Z235 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.72□□□□□ -0.37
Gm3543D3Z235 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.72□□□□□ -0.37
Gm3543D3Z235 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Gm3543D3Z235 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm3543D3Z235 Gm27533-201ENSMUST00000183800 152 ntBASIC12.72□□□□□ -0.37
Gm3543D3Z235 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.72□□□□□ -0.37
Gm3543D3Z235 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Gm3543D3Z235 Gm37230-201ENSMUST00000194491 818 ntBASIC12.72□□□□□ -0.37
Gm3543D3Z235 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.72□□□□□ -0.37
Gm3543D3Z235 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.72□□□□□ -0.37
Gm3543D3Z235 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm3543D3Z235 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Gm3543D3Z235 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.72□□□□□ -0.37
Gm3543D3Z235 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm3543D3Z235 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm3543D3Z235 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.72□□□□□ -0.37
Gm3543D3Z235 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm3543D3Z235 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm3543D3Z235 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm3543D3Z235 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm3543D3Z235 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm3543D3Z235 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm3543D3Z235 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gm3543D3Z235 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
Gm3543D3Z235 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.71□□□□□ -0.37
Gm3543D3Z235 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gm3543D3Z235 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Gm3543D3Z235 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gm3543D3Z235 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gm3543D3Z235 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gm3543D3Z235 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gm3543D3Z235 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.71□□□□□ -0.37
Gm3543D3Z235 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gm3543D3Z235 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gm3543D3Z235 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gm3543D3Z235 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gm3543D3Z235 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gm3543D3Z235 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gm3543D3Z235 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.71□□□□□ -0.37
Gm3543D3Z235 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.71□□□□□ -0.37
Gm3543D3Z235 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.71□□□□□ -0.37
Gm3543D3Z235 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gm3543D3Z235 Mir7684-201ENSMUST00000183858 60 ntBASIC12.71□□□□□ -0.37
Gm3543D3Z235 Gm27989-201ENSMUST00000184721 107 ntBASIC12.71□□□□□ -0.37
Gm3543D3Z235 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gm3543D3Z235 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Gm3543D3Z235 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Gm3543D3Z235 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.71□□□□□ -0.37
Gm3543D3Z235 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.71□□□□□ -0.37
Gm3543D3Z235 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gm3543D3Z235 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gm3543D3Z235 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gm3543D3Z235 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Gm3543D3Z235 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gm3543D3Z235 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Gm3543D3Z235 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Gm3543D3Z235 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Gm3543D3Z235 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Gm3543D3Z235 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Gm3543D3Z235 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Gm3543D3Z235 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Gm3543D3Z235 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Gm3543D3Z235 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Gm3543D3Z235 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Gm3543D3Z235 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Gm3543D3Z235 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3543D3Z235 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Gm3543D3Z235 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3543D3Z235 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.7□□□□□ -0.38
Gm3543D3Z235 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3543D3Z235 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3543D3Z235 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3543D3Z235 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3543D3Z235 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Gm3543D3Z235 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.7□□□□□ -0.38
Gm3543D3Z235 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Gm3543D3Z235 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3543D3Z235 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3543D3Z235 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3543D3Z235 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.7□□□□□ -0.38
Gm3543D3Z235 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3543D3Z235 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Gm3543D3Z235 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3543D3Z235 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Gm3543D3Z235 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3543D3Z235 Gm14042-201ENSMUST00000120139 833 ntBASIC12.7□□□□□ -0.38
Gm3543D3Z235 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.7□□□□□ -0.38
Gm3543D3Z235 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3543D3Z235 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3543D3Z235 Gm44344-201ENSMUST00000200287 129 ntBASIC12.7□□□□□ -0.38
Gm3543D3Z235 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.7□□□□□ -0.38
Gm3543D3Z235 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3543D3Z235 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3543D3Z235 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms