Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 AC167013.2-201ENSMUST00000228520 2684 ntBASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Mir698-201ENSMUST00000102164 109 ntBASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Tmf1B9EKI3 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Gm24420-201ENSMUST00000176676 59 ntBASIC18.95■□□□□ 0.62
Tmf1B9EKI3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Tmf1B9EKI3 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Tmf1B9EKI3 Gm15222-202ENSMUST00000228667 1726 ntBASIC18.94■□□□□ 0.62
Tmf1B9EKI3 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tmf1B9EKI3 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tmf1B9EKI3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tmf1B9EKI3 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tmf1B9EKI3 Gm12490-201ENSMUST00000120255 560 ntBASIC18.94■□□□□ 0.62
Tmf1B9EKI3 Gm2445-201ENSMUST00000182798 989 ntBASIC18.94■□□□□ 0.62
Tmf1B9EKI3 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tmf1B9EKI3 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tmf1B9EKI3 Gm5279-201ENSMUST00000199575 745 ntBASIC18.94■□□□□ 0.62
Tmf1B9EKI3 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tmf1B9EKI3 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tmf1B9EKI3 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tmf1B9EKI3 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tmf1B9EKI3 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tmf1B9EKI3 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tmf1B9EKI3 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tmf1B9EKI3 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tmf1B9EKI3 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC18.94■□□□□ 0.62
Tmf1B9EKI3 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tmf1B9EKI3 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tmf1B9EKI3 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tmf1B9EKI3 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tmf1B9EKI3 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tmf1B9EKI3 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tmf1B9EKI3 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tmf1B9EKI3 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tmf1B9EKI3 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Tmf1B9EKI3 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tmf1B9EKI3 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tmf1B9EKI3 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Tmf1B9EKI3 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Tmf1B9EKI3 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC18.93■□□□□ 0.62
Tmf1B9EKI3 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tmf1B9EKI3 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC18.93■□□□□ 0.62
Tmf1B9EKI3 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC18.93■□□□□ 0.62
Tmf1B9EKI3 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Tmf1B9EKI3 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC18.93■□□□□ 0.62
Tmf1B9EKI3 Gm28631-201ENSMUST00000190740 334 ntBASIC18.93■□□□□ 0.62
Tmf1B9EKI3 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC18.93■□□□□ 0.62
Tmf1B9EKI3 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tmf1B9EKI3 Cdk7-205ENSMUST00000225990 1159 ntBASIC18.93■□□□□ 0.62
Tmf1B9EKI3 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tmf1B9EKI3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC18.93■□□□□ 0.62
Tmf1B9EKI3 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tmf1B9EKI3 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tmf1B9EKI3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tmf1B9EKI3 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tmf1B9EKI3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tmf1B9EKI3 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tmf1B9EKI3 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tmf1B9EKI3 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmf1B9EKI3 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmf1B9EKI3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmf1B9EKI3 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmf1B9EKI3 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmf1B9EKI3 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmf1B9EKI3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC18.92■□□□□ 0.62
Tmf1B9EKI3 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmf1B9EKI3 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC18.92■□□□□ 0.62
Tmf1B9EKI3 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmf1B9EKI3 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tmf1B9EKI3 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tmf1B9EKI3 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmf1B9EKI3 Ldha-ps-201ENSMUST00000119390 995 ntBASIC18.92■□□□□ 0.62
Tmf1B9EKI3 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmf1B9EKI3 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC18.92■□□□□ 0.62
Tmf1B9EKI3 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC18.92■□□□□ 0.62
Tmf1B9EKI3 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmf1B9EKI3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmf1B9EKI3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Tmf1B9EKI3 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmf1B9EKI3 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tmf1B9EKI3 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmf1B9EKI3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmf1B9EKI3 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmf1B9EKI3 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tmf1B9EKI3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms