Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rrn3B2RS91 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rrn3B2RS91 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rrn3B2RS91 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rrn3B2RS91 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rrn3B2RS91 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.15□□□□□ -0.14
Rrn3B2RS91 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrn3B2RS91 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.15□□□□□ -0.14
Rrn3B2RS91 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.15□□□□□ -0.14
Rrn3B2RS91 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrn3B2RS91 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrn3B2RS91 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrn3B2RS91 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.15□□□□□ -0.14
Rrn3B2RS91 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrn3B2RS91 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rrn3B2RS91 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rrn3B2RS91 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrn3B2RS91 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrn3B2RS91 Gm15957-201ENSMUST00000118893 974 ntBASIC14.15□□□□□ -0.14
Rrn3B2RS91 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrn3B2RS91 Gm3436-201ENSMUST00000179930 840 ntBASIC14.15□□□□□ -0.14
Rrn3B2RS91 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rrn3B2RS91 Gm9229-201ENSMUST00000222777 126 ntBASIC14.15□□□□□ -0.14
Rrn3B2RS91 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrn3B2RS91 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.15□□□□□ -0.14
Rrn3B2RS91 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rrn3B2RS91 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.15□□□□□ -0.14
Rrn3B2RS91 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rrn3B2RS91 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Rrn3B2RS91 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrn3B2RS91 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrn3B2RS91 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrn3B2RS91 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrn3B2RS91 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrn3B2RS91 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rrn3B2RS91 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrn3B2RS91 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrn3B2RS91 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrn3B2RS91 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rrn3B2RS91 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rrn3B2RS91 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrn3B2RS91 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rrn3B2RS91 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.14□□□□□ -0.15
Rrn3B2RS91 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.14□□□□□ -0.15
Rrn3B2RS91 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.14□□□□□ -0.15
Rrn3B2RS91 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rrn3B2RS91 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rrn3B2RS91 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rrn3B2RS91 Gm27321-201ENSMUST00000185021 205 ntBASIC14.14□□□□□ -0.15
Rrn3B2RS91 Gm20949-201ENSMUST00000206478 952 ntBASIC14.14□□□□□ -0.15
Rrn3B2RS91 Gm44608-201ENSMUST00000206827 855 ntBASIC14.14□□□□□ -0.15
Rrn3B2RS91 Gm46209-201ENSMUST00000217912 553 ntBASIC14.14□□□□□ -0.15
Rrn3B2RS91 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrn3B2RS91 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrn3B2RS91 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrn3B2RS91 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrn3B2RS91 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrn3B2RS91 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rrn3B2RS91 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrn3B2RS91 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rrn3B2RS91 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrn3B2RS91 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrn3B2RS91 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrn3B2RS91 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Rrn3B2RS91 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rrn3B2RS91 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrn3B2RS91 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrn3B2RS91 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrn3B2RS91 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrn3B2RS91 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrn3B2RS91 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrn3B2RS91 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrn3B2RS91 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrn3B2RS91 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrn3B2RS91 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.13□□□□□ -0.15
Rrn3B2RS91 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrn3B2RS91 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrn3B2RS91 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrn3B2RS91 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrn3B2RS91 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.13□□□□□ -0.15
Rrn3B2RS91 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rrn3B2RS91 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrn3B2RS91 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrn3B2RS91 Gm27989-201ENSMUST00000184721 107 ntBASIC14.13□□□□□ -0.15
Rrn3B2RS91 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rrn3B2RS91 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.13□□□□□ -0.15
Rrn3B2RS91 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rrn3B2RS91 Gm9063-201ENSMUST00000223299 582 ntBASIC14.13□□□□□ -0.15
Rrn3B2RS91 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.13□□□□□ -0.15
Rrn3B2RS91 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrn3B2RS91 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrn3B2RS91 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrn3B2RS91 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rrn3B2RS91 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rrn3B2RS91 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrn3B2RS91 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Rrn3B2RS91 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rrn3B2RS91 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rrn3B2RS91 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrn3B2RS91 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms