Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Spr-ps1-201ENSMUST00000089584 605 ntBASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Gm44357-201ENSMUST00000195897 142 ntBASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Gm19658-201ENSMUST00000196231 138 ntBASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Gm44367-201ENSMUST00000196836 138 ntBASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Gm44350-201ENSMUST00000197197 138 ntBASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Gm44390-201ENSMUST00000197533 144 ntBASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Gm44313-201ENSMUST00000198018 138 ntBASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Gm44486-201ENSMUST00000198508 138 ntBASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Gm44314-201ENSMUST00000199263 138 ntBASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Gm44394-201ENSMUST00000199558 138 ntBASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Gm44484-201ENSMUST00000199873 138 ntBASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Gm44466-201ENSMUST00000200264 138 ntBASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Gm44359-201ENSMUST00000200671 138 ntBASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gm12887B1AVM1 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.59
Gm12887B1AVM1 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm12887B1AVM1 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.33□□□□□ -0.6
Gm12887B1AVM1 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm12887B1AVM1 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Gm12887B1AVM1 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm12887B1AVM1 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.33□□□□□ -0.6
Gm12887B1AVM1 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Gm12887B1AVM1 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.33□□□□□ -0.6
Gm12887B1AVM1 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm12887B1AVM1 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.33□□□□□ -0.6
Gm12887B1AVM1 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.33□□□□□ -0.6
Gm12887B1AVM1 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Gm12887B1AVM1 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm12887B1AVM1 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm12887B1AVM1 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.33□□□□□ -0.6
Gm12887B1AVM1 Gm25990-201ENSMUST00000102440 86 ntBASIC11.33□□□□□ -0.6
Gm12887B1AVM1 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm12887B1AVM1 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms