Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a6B1AVK5 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Gm16202-201ENSMUST00000117532 544 ntBASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Gm5896-201ENSMUST00000189662 1024 ntBASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 AC022775.2-201ENSMUST00000227885 646 ntBASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Mir877-201ENSMUST00000104738 85 ntBASIC14.14□□□□□ -0.15
Col4a6B1AVK5 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Gm17376-201ENSMUST00000166016 84 ntBASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Gm44069-201ENSMUST00000204898 506 ntBASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a6B1AVK5 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.13□□□□□ -0.15
Col4a6B1AVK5 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a6B1AVK5 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a6B1AVK5 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a6B1AVK5 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a6B1AVK5 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a6B1AVK5 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a6B1AVK5 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a6B1AVK5 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
Col4a6B1AVK5 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Col4a6B1AVK5 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Col4a6B1AVK5 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Col4a6B1AVK5 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a6B1AVK5 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a6B1AVK5 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Col4a6B1AVK5 Gm13297-201ENSMUST00000120205 934 ntBASIC14.13□□□□□ -0.15
Col4a6B1AVK5 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Col4a6B1AVK5 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a6B1AVK5 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.13□□□□□ -0.15
Col4a6B1AVK5 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.13□□□□□ -0.15
Col4a6B1AVK5 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.13□□□□□ -0.15
Col4a6B1AVK5 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.13□□□□□ -0.15
Col4a6B1AVK5 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a6B1AVK5 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a6B1AVK5 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a6B1AVK5 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a6B1AVK5 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Gm11637-201ENSMUST00000120601 592 ntBASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Col4a6B1AVK5 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.12□□□□□ -0.15
Col4a6B1AVK5 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms