Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubb1A2AQ07 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Tubb1A2AQ07 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.37□□□□□ -0.11
Tubb1A2AQ07 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubb1A2AQ07 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Tubb1A2AQ07 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tubb1A2AQ07 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubb1A2AQ07 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubb1A2AQ07 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tubb1A2AQ07 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.37□□□□□ -0.11
Tubb1A2AQ07 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.37□□□□□ -0.11
Tubb1A2AQ07 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tubb1A2AQ07 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.37□□□□□ -0.11
Tubb1A2AQ07 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.37□□□□□ -0.11
Tubb1A2AQ07 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.37□□□□□ -0.11
Tubb1A2AQ07 Dupd1-202ENSMUST00000224735 548 ntBASIC14.37□□□□□ -0.11
Tubb1A2AQ07 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubb1A2AQ07 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubb1A2AQ07 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubb1A2AQ07 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tubb1A2AQ07 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubb1A2AQ07 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubb1A2AQ07 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubb1A2AQ07 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tubb1A2AQ07 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tubb1A2AQ07 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Tubb1A2AQ07 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tubb1A2AQ07 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubb1A2AQ07 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubb1A2AQ07 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 AA543401-201ENSMUST00000164248 1269 ntBASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Gm2445-201ENSMUST00000182798 989 ntBASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Gm27397-201ENSMUST00000184997 107 ntBASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Gm5779-201ENSMUST00000218467 910 ntBASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Gm16476-201ENSMUST00000221544 139 ntBASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb1A2AQ07 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms