Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.02■□□□□ 0.16
Ccdc112A0AUP1 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.02■□□□□ 0.16
Ccdc112A0AUP1 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.02■□□□□ 0.16
Ccdc112A0AUP1 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc112A0AUP1 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc112A0AUP1 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc112A0AUP1 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc112A0AUP1 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc112A0AUP1 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc112A0AUP1 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc112A0AUP1 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc112A0AUP1 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
Ccdc112A0AUP1 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Ccdc112A0AUP1 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc112A0AUP1 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc112A0AUP1 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc112A0AUP1 Ksr1-207ENSMUST00000226282 5260 ntBASIC16.01■□□□□ 0.15
Ccdc112A0AUP1 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc112A0AUP1 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
Ccdc112A0AUP1 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ccdc112A0AUP1 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc112A0AUP1 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc112A0AUP1 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ccdc112A0AUP1 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc112A0AUP1 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc112A0AUP1 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc112A0AUP1 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc112A0AUP1 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ccdc112A0AUP1 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc112A0AUP1 Gm18206-201ENSMUST00000207027 926 ntBASIC16.01■□□□□ 0.15
Ccdc112A0AUP1 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc112A0AUP1 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc112A0AUP1 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc112A0AUP1 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc112A0AUP1 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc112A0AUP1 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc112A0AUP1 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc112A0AUP1 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc112A0AUP1 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.01■□□□□ 0.15
Ccdc112A0AUP1 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc112A0AUP1 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc112A0AUP1 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc112A0AUP1 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc112A0AUP1 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc112A0AUP1 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc112A0AUP1 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Ccdc112A0AUP1 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc112A0AUP1 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc112A0AUP1 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc112A0AUP1 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16■□□□□ 0.15
Ccdc112A0AUP1 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16■□□□□ 0.15
Ccdc112A0AUP1 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16■□□□□ 0.15
Ccdc112A0AUP1 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc112A0AUP1 Gm15467-201ENSMUST00000120582 445 ntBASIC16■□□□□ 0.15
Ccdc112A0AUP1 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ccdc112A0AUP1 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16■□□□□ 0.15
Ccdc112A0AUP1 AA619741-201ENSMUST00000195095 646 ntBASIC16■□□□□ 0.15
Ccdc112A0AUP1 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ccdc112A0AUP1 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc112A0AUP1 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc112A0AUP1 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16■□□□□ 0.15
Ccdc112A0AUP1 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc112A0AUP1 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc112A0AUP1 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc112A0AUP1 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc112A0AUP1 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc112A0AUP1 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC16■□□□□ 0.15
Ccdc112A0AUP1 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc112A0AUP1 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc112A0AUP1 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc112A0AUP1 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc112A0AUP1 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ccdc112A0AUP1 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc112A0AUP1 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ccdc112A0AUP1 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc112A0AUP1 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Ccdc112A0AUP1 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc112A0AUP1 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Gm11745-201ENSMUST00000121669 448 ntBASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms