Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap99A0A140LIX9 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.78■□□□□ 0.28
Cfap99A0A140LIX9 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.78■□□□□ 0.28
Cfap99A0A140LIX9 Gm9797-201ENSMUST00000052902 613 ntBASIC16.78■□□□□ 0.28
Cfap99A0A140LIX9 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap99A0A140LIX9 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Cfap99A0A140LIX9 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.78■□□□□ 0.28
Cfap99A0A140LIX9 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap99A0A140LIX9 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap99A0A140LIX9 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap99A0A140LIX9 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap99A0A140LIX9 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap99A0A140LIX9 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap99A0A140LIX9 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap99A0A140LIX9 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.78■□□□□ 0.28
Cfap99A0A140LIX9 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cfap99A0A140LIX9 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap99A0A140LIX9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap99A0A140LIX9 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap99A0A140LIX9 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cfap99A0A140LIX9 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cfap99A0A140LIX9 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cfap99A0A140LIX9 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cfap99A0A140LIX9 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cfap99A0A140LIX9 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cfap99A0A140LIX9 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cfap99A0A140LIX9 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cfap99A0A140LIX9 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cfap99A0A140LIX9 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cfap99A0A140LIX9 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Cfap99A0A140LIX9 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cfap99A0A140LIX9 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cfap99A0A140LIX9 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cfap99A0A140LIX9 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Cfap99A0A140LIX9 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.77■□□□□ 0.28
Cfap99A0A140LIX9 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cfap99A0A140LIX9 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.77■□□□□ 0.28
Cfap99A0A140LIX9 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cfap99A0A140LIX9 Gm21854-201ENSMUST00000179901 471 ntBASIC16.77■□□□□ 0.28
Cfap99A0A140LIX9 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cfap99A0A140LIX9 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.77■□□□□ 0.28
Cfap99A0A140LIX9 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16.77■□□□□ 0.28
Cfap99A0A140LIX9 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cfap99A0A140LIX9 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cfap99A0A140LIX9 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cfap99A0A140LIX9 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.77■□□□□ 0.28
Cfap99A0A140LIX9 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cfap99A0A140LIX9 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cfap99A0A140LIX9 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cfap99A0A140LIX9 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cfap99A0A140LIX9 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cfap99A0A140LIX9 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cfap99A0A140LIX9 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cfap99A0A140LIX9 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cfap99A0A140LIX9 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cfap99A0A140LIX9 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cfap99A0A140LIX9 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Cfap99A0A140LIX9 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cfap99A0A140LIX9 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cfap99A0A140LIX9 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cfap99A0A140LIX9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cfap99A0A140LIX9 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cfap99A0A140LIX9 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cfap99A0A140LIX9 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cfap99A0A140LIX9 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cfap99A0A140LIX9 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.76■□□□□ 0.27
Cfap99A0A140LIX9 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Cfap99A0A140LIX9 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC16.76■□□□□ 0.27
Cfap99A0A140LIX9 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cfap99A0A140LIX9 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.76■□□□□ 0.27
Cfap99A0A140LIX9 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.76■□□□□ 0.27
Cfap99A0A140LIX9 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cfap99A0A140LIX9 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cfap99A0A140LIX9 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Cfap99A0A140LIX9 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cfap99A0A140LIX9 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cfap99A0A140LIX9 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cfap99A0A140LIX9 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cfap99A0A140LIX9 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cfap99A0A140LIX9 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
Cfap99A0A140LIX9 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cfap99A0A140LIX9 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cfap99A0A140LIX9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cfap99A0A140LIX9 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cfap99A0A140LIX9 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cfap99A0A140LIX9 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cfap99A0A140LIX9 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cfap99A0A140LIX9 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.75■□□□□ 0.27
Cfap99A0A140LIX9 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cfap99A0A140LIX9 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cfap99A0A140LIX9 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cfap99A0A140LIX9 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cfap99A0A140LIX9 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.75■□□□□ 0.27
Cfap99A0A140LIX9 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cfap99A0A140LIX9 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cfap99A0A140LIX9 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cfap99A0A140LIX9 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cfap99A0A140LIX9 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cfap99A0A140LIX9 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Cfap99A0A140LIX9 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms