Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC10.21□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC10.21□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm13015-201ENSMUST00000118674 204 ntBASIC10.21□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm6222-201ENSMUST00000120787 396 ntBASIC10.21□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC10.21□□□□□ -0.77
Trav9n-2A0A0G2JDP3 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm8116-201ENSMUST00000182917 1201 ntBASIC10.21□□□□□ -0.77
Trav9n-2A0A0G2JDP3 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm2756-201ENSMUST00000195851 400 ntBASIC10.21□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC10.21□□□□□ -0.77
Trav9n-2A0A0G2JDP3 AC121598.1-201ENSMUST00000228224 1019 ntBASIC10.21□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav9n-2A0A0G2JDP3 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav9n-2A0A0G2JDP3 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC10.21□□□□□ -0.78
Trav9n-2A0A0G2JDP3 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC10.21□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC10.21□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm6736-201ENSMUST00000166583 948 ntBASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm24158-201ENSMUST00000175263 71 ntBASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 AC151286.1-201ENSMUST00000198489 145 ntBASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 AC149588.3-201ENSMUST00000227515 150 ntBASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms