Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
H2afb2S4R1M3 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Gm15693-201ENSMUST00000120470 637 ntBASIC14.06□□□□□ -0.16
H2afb2S4R1M3 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Gm16476-201ENSMUST00000221544 139 ntBASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
H2afb2S4R1M3 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Gm24543-201ENSMUST00000103867 82 ntBASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Gm28630-201ENSMUST00000187806 498 ntBASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb2S4R1M3 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb2S4R1M3 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb2S4R1M3 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.04□□□□□ -0.16
H2afb2S4R1M3 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb2S4R1M3 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
H2afb2S4R1M3 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb2S4R1M3 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb2S4R1M3 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
H2afb2S4R1M3 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
H2afb2S4R1M3 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb2S4R1M3 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb2S4R1M3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
H2afb2S4R1M3 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb2S4R1M3 Gm14701-201ENSMUST00000117156 348 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms