Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H2afb3S4R1G7 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H2afb3S4R1G7 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H2afb3S4R1G7 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H2afb3S4R1G7 Gm11025-201ENSMUST00000140773 466 ntBASIC12.65□□□□□ -0.38
H2afb3S4R1G7 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H2afb3S4R1G7 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
H2afb3S4R1G7 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.65□□□□□ -0.38
H2afb3S4R1G7 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H2afb3S4R1G7 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.65□□□□□ -0.38
H2afb3S4R1G7 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.65□□□□□ -0.38
H2afb3S4R1G7 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
H2afb3S4R1G7 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.65□□□□□ -0.38
H2afb3S4R1G7 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
H2afb3S4R1G7 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H2afb3S4R1G7 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
H2afb3S4R1G7 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
H2afb3S4R1G7 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H2afb3S4R1G7 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H2afb3S4R1G7 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H2afb3S4R1G7 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.64□□□□□ -0.39
H2afb3S4R1G7 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb3S4R1G7 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Gm12882-201ENSMUST00000121696 517 ntBASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Gm18206-201ENSMUST00000207027 926 ntBASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb3S4R1G7 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb3S4R1G7 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms