Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Dupd1-202ENSMUST00000224735 548 ntBASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Shd-206ENSMUST00000225145 998 ntBASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Clcf1Q9QZM3 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clcf1Q9QZM3 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clcf1Q9QZM3 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clcf1Q9QZM3 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clcf1Q9QZM3 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clcf1Q9QZM3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clcf1Q9QZM3 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.77□□□□□ -0.36
Clcf1Q9QZM3 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clcf1Q9QZM3 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clcf1Q9QZM3 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Clcf1Q9QZM3 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clcf1Q9QZM3 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clcf1Q9QZM3 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Clcf1Q9QZM3 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.77□□□□□ -0.37
Clcf1Q9QZM3 Gm45453-201ENSMUST00000211758 853 ntBASIC12.77□□□□□ -0.37
Clcf1Q9QZM3 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clcf1Q9QZM3 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.77□□□□□ -0.37
Clcf1Q9QZM3 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clcf1Q9QZM3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clcf1Q9QZM3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clcf1Q9QZM3 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clcf1Q9QZM3 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clcf1Q9QZM3 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clcf1Q9QZM3 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clcf1Q9QZM3 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clcf1Q9QZM3 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clcf1Q9QZM3 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.77□□□□□ -0.37
Clcf1Q9QZM3 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.77□□□□□ -0.37
Clcf1Q9QZM3 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clcf1Q9QZM3 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clcf1Q9QZM3 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clcf1Q9QZM3 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.77□□□□□ -0.37
Clcf1Q9QZM3 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clcf1Q9QZM3 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Gm15653-201ENSMUST00000119247 907 ntBASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Mir6977-201ENSMUST00000184960 64 ntBASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clcf1Q9QZM3 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clcf1Q9QZM3 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clcf1Q9QZM3 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms