Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Prg4Q9JM99 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Prg4Q9JM99 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Prg4Q9JM99 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Prg4Q9JM99 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Prg4Q9JM99 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Prg4Q9JM99 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Prg4Q9JM99 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Prg4Q9JM99 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Prg4Q9JM99 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Prg4Q9JM99 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Prg4Q9JM99 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.77□□□□□ -0.37
Prg4Q9JM99 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Prg4Q9JM99 Gm43930-201ENSMUST00000203868 845 ntBASIC12.77□□□□□ -0.37
Prg4Q9JM99 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Prg4Q9JM99 Gm45668-201ENSMUST00000211271 493 ntBASIC12.77□□□□□ -0.37
Prg4Q9JM99 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.77□□□□□ -0.37
Prg4Q9JM99 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.77□□□□□ -0.37
Prg4Q9JM99 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.77□□□□□ -0.37
Prg4Q9JM99 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prg4Q9JM99 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Prg4Q9JM99 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prg4Q9JM99 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.77□□□□□ -0.37
Prg4Q9JM99 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prg4Q9JM99 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prg4Q9JM99 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prg4Q9JM99 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.77□□□□□ -0.37
Prg4Q9JM99 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prg4Q9JM99 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prg4Q9JM99 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prg4Q9JM99 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Prg4Q9JM99 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prg4Q9JM99 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prg4Q9JM99 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prg4Q9JM99 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.76□□□□□ -0.37
Prg4Q9JM99 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Gm37917-201ENSMUST00000194711 392 ntBASIC12.76□□□□□ -0.37
Prg4Q9JM99 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Prg4Q9JM99 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.76□□□□□ -0.37
Prg4Q9JM99 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.76□□□□□ -0.37
Prg4Q9JM99 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prg4Q9JM99 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prg4Q9JM99 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prg4Q9JM99 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prg4Q9JM99 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prg4Q9JM99 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prg4Q9JM99 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prg4Q9JM99 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Prg4Q9JM99 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Prg4Q9JM99 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.75□□□□□ -0.37
Prg4Q9JM99 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.75□□□□□ -0.37
Prg4Q9JM99 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.75□□□□□ -0.37
Prg4Q9JM99 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.75□□□□□ -0.37
Prg4Q9JM99 Gm32390-201ENSMUST00000212713 1172 ntBASIC12.75□□□□□ -0.37
Prg4Q9JM99 Gm18624-201ENSMUST00000220966 658 ntBASIC12.75□□□□□ -0.37
Prg4Q9JM99 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prg4Q9JM99 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prg4Q9JM99 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prg4Q9JM99 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms