Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.68□□□□□ -0.38
Sec61a2Q9JLR1 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a2Q9JLR1 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a2Q9JLR1 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a2Q9JLR1 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a2Q9JLR1 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a2Q9JLR1 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a2Q9JLR1 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a2Q9JLR1 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a2Q9JLR1 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a2Q9JLR1 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a2Q9JLR1 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a2Q9JLR1 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a2Q9JLR1 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a2Q9JLR1 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a2Q9JLR1 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Gm5312-201ENSMUST00000203728 547 ntBASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a2Q9JLR1 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.65□□□□□ -0.38
Sec61a2Q9JLR1 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.65□□□□□ -0.38
Sec61a2Q9JLR1 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sec61a2Q9JLR1 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sec61a2Q9JLR1 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sec61a2Q9JLR1 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sec61a2Q9JLR1 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
Sec61a2Q9JLR1 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sec61a2Q9JLR1 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sec61a2Q9JLR1 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sec61a2Q9JLR1 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms