Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ripk4Q9ERK0 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ripk4Q9ERK0 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ripk4Q9ERK0 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ripk4Q9ERK0 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ripk4Q9ERK0 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ripk4Q9ERK0 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.14■□□□□ 0.33
Ripk4Q9ERK0 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Ripk4Q9ERK0 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ripk4Q9ERK0 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ripk4Q9ERK0 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ripk4Q9ERK0 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ripk4Q9ERK0 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
Ripk4Q9ERK0 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ripk4Q9ERK0 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ripk4Q9ERK0 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ripk4Q9ERK0 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ripk4Q9ERK0 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ripk4Q9ERK0 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC17.13■□□□□ 0.33
Ripk4Q9ERK0 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC17.13■□□□□ 0.33
Ripk4Q9ERK0 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Ripk4Q9ERK0 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC17.13■□□□□ 0.33
Ripk4Q9ERK0 Gm31326-201ENSMUST00000191856 1048 ntBASIC17.13■□□□□ 0.33
Ripk4Q9ERK0 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Ripk4Q9ERK0 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC17.13■□□□□ 0.33
Ripk4Q9ERK0 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ripk4Q9ERK0 Gm45384-201ENSMUST00000210451 277 ntBASIC17.13■□□□□ 0.33
Ripk4Q9ERK0 Gm45668-201ENSMUST00000211271 493 ntBASIC17.13■□□□□ 0.33
Ripk4Q9ERK0 AC154687.2-201ENSMUST00000223853 640 ntBASIC17.13■□□□□ 0.33
Ripk4Q9ERK0 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ripk4Q9ERK0 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ripk4Q9ERK0 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ripk4Q9ERK0 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ripk4Q9ERK0 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ripk4Q9ERK0 Gm9115-201ENSMUST00000120192 1348 ntBASIC17.13■□□□□ 0.33
Ripk4Q9ERK0 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ripk4Q9ERK0 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ripk4Q9ERK0 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ripk4Q9ERK0 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ripk4Q9ERK0 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ripk4Q9ERK0 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ripk4Q9ERK0 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ripk4Q9ERK0 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ripk4Q9ERK0 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ripk4Q9ERK0 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ripk4Q9ERK0 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ripk4Q9ERK0 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ripk4Q9ERK0 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ripk4Q9ERK0 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Ripk4Q9ERK0 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ripk4Q9ERK0 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ripk4Q9ERK0 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ripk4Q9ERK0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.12■□□□□ 0.33
Ripk4Q9ERK0 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ripk4Q9ERK0 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ripk4Q9ERK0 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ripk4Q9ERK0 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC17.12■□□□□ 0.33
Ripk4Q9ERK0 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC17.12■□□□□ 0.33
Ripk4Q9ERK0 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC17.12■□□□□ 0.33
Ripk4Q9ERK0 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ripk4Q9ERK0 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC17.12■□□□□ 0.33
Ripk4Q9ERK0 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Ripk4Q9ERK0 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ripk4Q9ERK0 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ripk4Q9ERK0 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ripk4Q9ERK0 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC17.12■□□□□ 0.33
Ripk4Q9ERK0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ripk4Q9ERK0 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ripk4Q9ERK0 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ripk4Q9ERK0 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ripk4Q9ERK0 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ripk4Q9ERK0 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC17.12■□□□□ 0.33
Ripk4Q9ERK0 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Ripk4Q9ERK0 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ripk4Q9ERK0 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ripk4Q9ERK0 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ripk4Q9ERK0 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ripk4Q9ERK0 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ripk4Q9ERK0 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ripk4Q9ERK0 Gm15460-201ENSMUST00000118147 391 ntBASIC17.11■□□□□ 0.33
Ripk4Q9ERK0 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC17.11■□□□□ 0.33
Ripk4Q9ERK0 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ripk4Q9ERK0 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ripk4Q9ERK0 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ripk4Q9ERK0 Gm10766-202ENSMUST00000194123 606 ntBASIC17.11■□□□□ 0.33
Ripk4Q9ERK0 Gm43433-201ENSMUST00000196573 481 ntBASIC17.11■□□□□ 0.33
Ripk4Q9ERK0 AC154846.1-201ENSMUST00000226278 862 ntBASIC17.11■□□□□ 0.33
Ripk4Q9ERK0 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ripk4Q9ERK0 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ripk4Q9ERK0 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ripk4Q9ERK0 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ripk4Q9ERK0 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ripk4Q9ERK0 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ripk4Q9ERK0 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ripk4Q9ERK0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.11■□□□□ 0.33
Ripk4Q9ERK0 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ripk4Q9ERK0 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ripk4Q9ERK0 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk4Q9ERK0 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk4Q9ERK0 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms