Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.89□□□□□ -0.19
Lima1Q9ERG0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lima1Q9ERG0 Gm9385-201ENSMUST00000117563 472 ntBASIC13.89□□□□□ -0.19
Lima1Q9ERG0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Lima1Q9ERG0 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.89□□□□□ -0.19
Lima1Q9ERG0 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.89□□□□□ -0.19
Lima1Q9ERG0 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lima1Q9ERG0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lima1Q9ERG0 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lima1Q9ERG0 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lima1Q9ERG0 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Lima1Q9ERG0 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Lima1Q9ERG0 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lima1Q9ERG0 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lima1Q9ERG0 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Lima1Q9ERG0 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lima1Q9ERG0 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lima1Q9ERG0 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lima1Q9ERG0 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Lima1Q9ERG0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lima1Q9ERG0 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lima1Q9ERG0 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lima1Q9ERG0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lima1Q9ERG0 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lima1Q9ERG0 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lima1Q9ERG0 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Gm12260-201ENSMUST00000122447 411 ntBASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 AW822252-206ENSMUST00000208904 237 ntBASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lima1Q9ERG0 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Lima1Q9ERG0 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lima1Q9ERG0 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lima1Q9ERG0 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lima1Q9ERG0 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lima1Q9ERG0 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lima1Q9ERG0 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lima1Q9ERG0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Lima1Q9ERG0 Gm11779-201ENSMUST00000118541 368 ntBASIC13.87□□□□□ -0.19
Lima1Q9ERG0 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.87□□□□□ -0.19
Lima1Q9ERG0 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.87□□□□□ -0.19
Lima1Q9ERG0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.87□□□□□ -0.19
Lima1Q9ERG0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.87□□□□□ -0.19
Lima1Q9ERG0 Gm44492-201ENSMUST00000197012 141 ntBASIC13.87□□□□□ -0.19
Lima1Q9ERG0 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lima1Q9ERG0 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lima1Q9ERG0 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.87□□□□□ -0.19
Lima1Q9ERG0 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.87□□□□□ -0.19
Lima1Q9ERG0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lima1Q9ERG0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lima1Q9ERG0 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lima1Q9ERG0 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lima1Q9ERG0 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Lima1Q9ERG0 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
Lima1Q9ERG0 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lima1Q9ERG0 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Lima1Q9ERG0 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lima1Q9ERG0 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms