Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Gm24543-201ENSMUST00000103867 82 ntBASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Gm2423-201ENSMUST00000074863 733 ntBASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdc40Q9DC48 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Gm9719-201ENSMUST00000162765 543 ntBASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Gm10275-202ENSMUST00000168697 495 ntBASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Gm10275-201ENSMUST00000092620 635 ntBASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cdc40Q9DC48 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdc40Q9DC48 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.05□□□□□ -0.32
Cdc40Q9DC48 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdc40Q9DC48 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Cdc40Q9DC48 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdc40Q9DC48 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdc40Q9DC48 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.05□□□□□ -0.32
Cdc40Q9DC48 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Cdc40Q9DC48 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdc40Q9DC48 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cdc40Q9DC48 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.05□□□□□ -0.32
Cdc40Q9DC48 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.05□□□□□ -0.32
Cdc40Q9DC48 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdc40Q9DC48 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Cdc40Q9DC48 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdc40Q9DC48 Gm27533-201ENSMUST00000183800 152 ntBASIC13.05□□□□□ -0.32
Cdc40Q9DC48 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdc40Q9DC48 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdc40Q9DC48 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.05□□□□□ -0.32
Cdc40Q9DC48 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cdc40Q9DC48 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdc40Q9DC48 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdc40Q9DC48 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdc40Q9DC48 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdc40Q9DC48 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdc40Q9DC48 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.05□□□□□ -0.32
Cdc40Q9DC48 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdc40Q9DC48 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdc40Q9DC48 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdc40Q9DC48 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdc40Q9DC48 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms