Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssmem1Q9D9Y8 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssmem1Q9D9Y8 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssmem1Q9D9Y8 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.15□□□□□ -0.46
Ssmem1Q9D9Y8 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssmem1Q9D9Y8 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssmem1Q9D9Y8 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ssmem1Q9D9Y8 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ssmem1Q9D9Y8 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ssmem1Q9D9Y8 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.15□□□□□ -0.47
Ssmem1Q9D9Y8 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ssmem1Q9D9Y8 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ssmem1Q9D9Y8 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Gm24694-201ENSMUST00000180054 110 ntBASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Gm27663-201ENSMUST00000184839 110 ntBASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Gm21470-201ENSMUST00000187680 696 ntBASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Gm37714-201ENSMUST00000194742 342 ntBASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssmem1Q9D9Y8 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Syt7-204ENSMUST00000223586 1344 ntBASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Gm4804-201ENSMUST00000182234 999 ntBASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Gm27437-201ENSMUST00000183429 107 ntBASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Gm18027-201ENSMUST00000218947 619 ntBASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Gm20445-201ENSMUST00000061905 565 ntBASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssmem1Q9D9Y8 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssmem1Q9D9Y8 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ssmem1Q9D9Y8 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssmem1Q9D9Y8 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.12□□□□□ -0.47
Ssmem1Q9D9Y8 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms