Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Gm13464-201ENSMUST00000119418 935 ntBASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Gm23634-201ENSMUST00000175071 91 ntBASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.22□□□□□ -0.13
Sf3a3Q9D554 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3a3Q9D554 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3a3Q9D554 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3a3Q9D554 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3a3Q9D554 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3a3Q9D554 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Sf3a3Q9D554 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3a3Q9D554 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3a3Q9D554 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3a3Q9D554 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Sf3a3Q9D554 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3a3Q9D554 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3a3Q9D554 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Sf3a3Q9D554 Gm8749-201ENSMUST00000117737 331 ntBASIC14.21□□□□□ -0.13
Sf3a3Q9D554 Gm11780-201ENSMUST00000136880 516 ntBASIC14.21□□□□□ -0.13
Sf3a3Q9D554 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Sf3a3Q9D554 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.21□□□□□ -0.13
Sf3a3Q9D554 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3a3Q9D554 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3a3Q9D554 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3a3Q9D554 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3a3Q9D554 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3a3Q9D554 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3a3Q9D554 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sf3a3Q9D554 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sf3a3Q9D554 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Sf3a3Q9D554 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Sf3a3Q9D554 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.21□□□□□ -0.14
Sf3a3Q9D554 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.21□□□□□ -0.14
Sf3a3Q9D554 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sf3a3Q9D554 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms