Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc7Q9D541 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc7Q9D541 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc7Q9D541 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc7Q9D541 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Ccdc7Q9D541 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.42■□□□□ 0.22
Ccdc7Q9D541 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.42■□□□□ 0.22
Ccdc7Q9D541 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.42■□□□□ 0.22
Ccdc7Q9D541 Gm29741-201ENSMUST00000192667 421 ntBASIC16.42■□□□□ 0.22
Ccdc7Q9D541 Gm37714-201ENSMUST00000194742 342 ntBASIC16.42■□□□□ 0.22
Ccdc7Q9D541 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.42■□□□□ 0.22
Ccdc7Q9D541 Gm16476-201ENSMUST00000221544 139 ntBASIC16.42■□□□□ 0.22
Ccdc7Q9D541 Dupd1-202ENSMUST00000224735 548 ntBASIC16.42■□□□□ 0.22
Ccdc7Q9D541 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc7Q9D541 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc7Q9D541 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc7Q9D541 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc7Q9D541 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc7Q9D541 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc7Q9D541 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.42■□□□□ 0.22
Ccdc7Q9D541 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc7Q9D541 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc7Q9D541 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC16.42■□□□□ 0.22
Ccdc7Q9D541 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc7Q9D541 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc7Q9D541 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc7Q9D541 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc7Q9D541 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc7Q9D541 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Ccdc7Q9D541 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc7Q9D541 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc7Q9D541 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc7Q9D541 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc7Q9D541 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc7Q9D541 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ccdc7Q9D541 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc7Q9D541 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc7Q9D541 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Ccdc7Q9D541 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc7Q9D541 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc7Q9D541 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ccdc7Q9D541 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc7Q9D541 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc7Q9D541 Gm43474-201ENSMUST00000196415 774 ntBASIC16.41■□□□□ 0.22
Ccdc7Q9D541 Gm6443-201ENSMUST00000203599 874 ntBASIC16.41■□□□□ 0.22
Ccdc7Q9D541 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc7Q9D541 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc7Q9D541 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc7Q9D541 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc7Q9D541 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc7Q9D541 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc7Q9D541 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.41■□□□□ 0.22
Ccdc7Q9D541 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc7Q9D541 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Ccdc7Q9D541 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc7Q9D541 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc7Q9D541 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc7Q9D541 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc7Q9D541 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc7Q9D541 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Gm38346-201ENSMUST00000192379 2639 ntBASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Gm44335-201ENSMUST00000196879 141 ntBASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Gm44297-201ENSMUST00000198304 141 ntBASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Gm44346-201ENSMUST00000198851 141 ntBASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc7Q9D541 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms