Protein–RNA interactions for Protein: Q9D0N8

Tmem88, Transmembrane protein 88, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88Q9D0N8 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem88Q9D0N8 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem88Q9D0N8 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Tmem88Q9D0N8 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem88Q9D0N8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Tmem88Q9D0N8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC11.11□□□□□ -0.63
Tmem88Q9D0N8 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem88Q9D0N8 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem88Q9D0N8 AC114585.2-202ENSMUST00000228094 426 ntBASIC11.11□□□□□ -0.63
Tmem88Q9D0N8 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem88Q9D0N8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem88Q9D0N8 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem88Q9D0N8 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem88Q9D0N8 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem88Q9D0N8 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem88Q9D0N8 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem88Q9D0N8 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem88Q9D0N8 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem88Q9D0N8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem88Q9D0N8 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem88Q9D0N8 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem88Q9D0N8 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem88Q9D0N8 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem88Q9D0N8 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 Zkscan4-202ENSMUST00000225845 1506 ntBASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 Gm14859-201ENSMUST00000117752 357 ntBASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 Matn2-203ENSMUST00000226766 3252 ntBASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.1□□□□□ -0.63
Tmem88Q9D0N8 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tmem88Q9D0N8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tmem88Q9D0N8 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tmem88Q9D0N8 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tmem88Q9D0N8 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tmem88Q9D0N8 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tmem88Q9D0N8 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tmem88Q9D0N8 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.09□□□□□ -0.63
Tmem88Q9D0N8 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tmem88Q9D0N8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Tmem88Q9D0N8 Gm33142-201ENSMUST00000193913 867 ntBASIC11.09□□□□□ -0.63
Tmem88Q9D0N8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tmem88Q9D0N8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tmem88Q9D0N8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tmem88Q9D0N8 Gm7367-201ENSMUST00000057611 492 ntBASIC11.09□□□□□ -0.63
Tmem88Q9D0N8 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tmem88Q9D0N8 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tmem88Q9D0N8 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tmem88Q9D0N8 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tmem88Q9D0N8 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tmem88Q9D0N8 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Tmem88Q9D0N8 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Tmem88Q9D0N8 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Tmem88Q9D0N8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tmem88Q9D0N8 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tmem88Q9D0N8 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tmem88Q9D0N8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tmem88Q9D0N8 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tmem88Q9D0N8 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.09□□□□□ -0.63
Tmem88Q9D0N8 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tmem88Q9D0N8 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tmem88Q9D0N8 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Tmem88Q9D0N8 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tmem88Q9D0N8 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tmem88Q9D0N8 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Tmem88Q9D0N8 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tmem88Q9D0N8 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.08□□□□□ -0.64
Tmem88Q9D0N8 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Tmem88Q9D0N8 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tmem88Q9D0N8 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tmem88Q9D0N8 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tmem88Q9D0N8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Tmem88Q9D0N8 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms