Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Gm9727-201ENSMUST00000161387 555 ntBASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ssr1Q9CY50 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Ssr1Q9CY50 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.27■□□□□ 0.04
Ssr1Q9CY50 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.27■□□□□ 0.04
Ssr1Q9CY50 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Ssr1Q9CY50 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ssr1Q9CY50 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ssr1Q9CY50 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ssr1Q9CY50 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
Ssr1Q9CY50 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ssr1Q9CY50 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ssr1Q9CY50 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Ssr1Q9CY50 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.27■□□□□ 0.04
Ssr1Q9CY50 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ssr1Q9CY50 Gm5479-201ENSMUST00000160578 435 ntBASIC15.27■□□□□ 0.04
Ssr1Q9CY50 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.27■□□□□ 0.04
Ssr1Q9CY50 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ssr1Q9CY50 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.27■□□□□ 0.04
Ssr1Q9CY50 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.27■□□□□ 0.04
Ssr1Q9CY50 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.27■□□□□ 0.04
Ssr1Q9CY50 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ssr1Q9CY50 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.27■□□□□ 0.04
Ssr1Q9CY50 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ssr1Q9CY50 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ssr1Q9CY50 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Ssr1Q9CY50 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Ssr1Q9CY50 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ssr1Q9CY50 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ssr1Q9CY50 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
Ssr1Q9CY50 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ssr1Q9CY50 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ssr1Q9CY50 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ssr1Q9CY50 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ssr1Q9CY50 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ssr1Q9CY50 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Ssr1Q9CY50 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.27■□□□□ 0.03
Ssr1Q9CY50 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Ssr1Q9CY50 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssr1Q9CY50 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssr1Q9CY50 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.26■□□□□ 0.03
Ssr1Q9CY50 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssr1Q9CY50 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssr1Q9CY50 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.26■□□□□ 0.03
Ssr1Q9CY50 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ssr1Q9CY50 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ssr1Q9CY50 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.26■□□□□ 0.03
Ssr1Q9CY50 Gm17271-201ENSMUST00000165535 355 ntBASIC15.26■□□□□ 0.03
Ssr1Q9CY50 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.26■□□□□ 0.03
Ssr1Q9CY50 Gm37230-201ENSMUST00000194491 818 ntBASIC15.26■□□□□ 0.03
Ssr1Q9CY50 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ssr1Q9CY50 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssr1Q9CY50 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ssr1Q9CY50 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.26■□□□□ 0.03
Ssr1Q9CY50 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ssr1Q9CY50 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssr1Q9CY50 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ssr1Q9CY50 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssr1Q9CY50 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.26■□□□□ 0.03
Ssr1Q9CY50 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ssr1Q9CY50 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssr1Q9CY50 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ssr1Q9CY50 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssr1Q9CY50 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.25■□□□□ 0.03
Ssr1Q9CY50 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ssr1Q9CY50 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.25■□□□□ 0.03
Ssr1Q9CY50 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ssr1Q9CY50 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssr1Q9CY50 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssr1Q9CY50 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssr1Q9CY50 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssr1Q9CY50 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ssr1Q9CY50 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ssr1Q9CY50 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms