Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc3Q9CW03 Gm18206-201ENSMUST00000207027 926 ntBASIC16.52■□□□□ 0.24
Smc3Q9CW03 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.52■□□□□ 0.24
Smc3Q9CW03 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Smc3Q9CW03 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Smc3Q9CW03 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc3Q9CW03 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Smc3Q9CW03 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc3Q9CW03 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smc3Q9CW03 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Smc3Q9CW03 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smc3Q9CW03 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smc3Q9CW03 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smc3Q9CW03 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smc3Q9CW03 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smc3Q9CW03 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc3Q9CW03 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.51■□□□□ 0.23
Smc3Q9CW03 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.51■□□□□ 0.23
Smc3Q9CW03 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc3Q9CW03 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc3Q9CW03 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc3Q9CW03 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc3Q9CW03 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.5■□□□□ 0.23
Smc3Q9CW03 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Smc3Q9CW03 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc3Q9CW03 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Smc3Q9CW03 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Smc3Q9CW03 Gm15957-201ENSMUST00000118893 974 ntBASIC16.5■□□□□ 0.23
Smc3Q9CW03 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.5■□□□□ 0.23
Smc3Q9CW03 Gm45612-201ENSMUST00000211320 160 ntBASIC16.5■□□□□ 0.23
Smc3Q9CW03 AC158529.1-201ENSMUST00000223618 239 ntBASIC16.5■□□□□ 0.23
Smc3Q9CW03 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.5■□□□□ 0.23
Smc3Q9CW03 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc3Q9CW03 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc3Q9CW03 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Smc3Q9CW03 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc3Q9CW03 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc3Q9CW03 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smc3Q9CW03 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.5■□□□□ 0.23
Smc3Q9CW03 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc3Q9CW03 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Smc3Q9CW03 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC16.5■□□□□ 0.23
Smc3Q9CW03 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc3Q9CW03 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Smc3Q9CW03 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc3Q9CW03 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc3Q9CW03 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc3Q9CW03 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smc3Q9CW03 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smc3Q9CW03 Pcgf5-211ENSMUST00000225920 6443 ntBASIC16.49■□□□□ 0.23
Smc3Q9CW03 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Smc3Q9CW03 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smc3Q9CW03 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smc3Q9CW03 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.49■□□□□ 0.23
Smc3Q9CW03 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.49■□□□□ 0.23
Smc3Q9CW03 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.49■□□□□ 0.23
Smc3Q9CW03 Gm14494-201ENSMUST00000118786 435 ntBASIC16.49■□□□□ 0.23
Smc3Q9CW03 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.49■□□□□ 0.23
Smc3Q9CW03 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.49■□□□□ 0.23
Smc3Q9CW03 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.49■□□□□ 0.23
Smc3Q9CW03 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.49■□□□□ 0.23
Smc3Q9CW03 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Smc3Q9CW03 Gm29310-201ENSMUST00000185468 696 ntBASIC16.49■□□□□ 0.23
Smc3Q9CW03 Gm21825-201ENSMUST00000185728 696 ntBASIC16.49■□□□□ 0.23
Smc3Q9CW03 Gm29109-201ENSMUST00000185895 696 ntBASIC16.49■□□□□ 0.23
Smc3Q9CW03 Gm21896-201ENSMUST00000186520 696 ntBASIC16.49■□□□□ 0.23
Smc3Q9CW03 Gm21873-201ENSMUST00000186728 696 ntBASIC16.49■□□□□ 0.23
Smc3Q9CW03 Gm21794-201ENSMUST00000187056 696 ntBASIC16.49■□□□□ 0.23
Smc3Q9CW03 Gm21880-201ENSMUST00000187275 696 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms