Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Otud1Q9CUB6 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Gm12585-201ENSMUST00000117307 290 ntBASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Gm9797-201ENSMUST00000052902 613 ntBASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Otud1Q9CUB6 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Gm12859-201ENSMUST00000117834 427 ntBASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.28□□□□□ -0.28
Otud1Q9CUB6 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Gm44608-201ENSMUST00000206827 855 ntBASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Otud1Q9CUB6 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Otud1Q9CUB6 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Otud1Q9CUB6 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Otud1Q9CUB6 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Otud1Q9CUB6 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Otud1Q9CUB6 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Otud1Q9CUB6 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Otud1Q9CUB6 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Otud1Q9CUB6 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Otud1Q9CUB6 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Otud1Q9CUB6 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Otud1Q9CUB6 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Otud1Q9CUB6 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Otud1Q9CUB6 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Otud1Q9CUB6 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Otud1Q9CUB6 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.27□□□□□ -0.29
Otud1Q9CUB6 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms