Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lrrc40Q9CRC8 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lrrc40Q9CRC8 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.98□□□□□ -0.17
Lrrc40Q9CRC8 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lrrc40Q9CRC8 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lrrc40Q9CRC8 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lrrc40Q9CRC8 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lrrc40Q9CRC8 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lrrc40Q9CRC8 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lrrc40Q9CRC8 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lrrc40Q9CRC8 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lrrc40Q9CRC8 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lrrc40Q9CRC8 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Lrrc40Q9CRC8 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Lrrc40Q9CRC8 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.98□□□□□ -0.17
Lrrc40Q9CRC8 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lrrc40Q9CRC8 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.98□□□□□ -0.17
Lrrc40Q9CRC8 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Gm11594-201ENSMUST00000122313 162 ntBASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Gm18766-201ENSMUST00000189811 808 ntBASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Gm43474-201ENSMUST00000196415 774 ntBASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrrc40Q9CRC8 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lrrc40Q9CRC8 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.96□□□□□ -0.17
Lrrc40Q9CRC8 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Lrrc40Q9CRC8 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lrrc40Q9CRC8 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lrrc40Q9CRC8 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lrrc40Q9CRC8 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lrrc40Q9CRC8 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lrrc40Q9CRC8 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.96□□□□□ -0.17
Lrrc40Q9CRC8 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lrrc40Q9CRC8 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Lrrc40Q9CRC8 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Lrrc40Q9CRC8 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.96□□□□□ -0.17
Lrrc40Q9CRC8 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lrrc40Q9CRC8 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lrrc40Q9CRC8 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.96□□□□□ -0.17
Lrrc40Q9CRC8 Gm24158-201ENSMUST00000175263 71 ntBASIC13.96□□□□□ -0.17
Lrrc40Q9CRC8 Gm29541-201ENSMUST00000191351 678 ntBASIC13.96□□□□□ -0.17
Lrrc40Q9CRC8 Gm2756-201ENSMUST00000195851 400 ntBASIC13.96□□□□□ -0.17
Lrrc40Q9CRC8 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.96□□□□□ -0.17
Lrrc40Q9CRC8 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.96□□□□□ -0.17
Lrrc40Q9CRC8 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lrrc40Q9CRC8 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lrrc40Q9CRC8 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lrrc40Q9CRC8 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lrrc40Q9CRC8 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lrrc40Q9CRC8 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lrrc40Q9CRC8 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Lrrc40Q9CRC8 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.96□□□□□ -0.18
Lrrc40Q9CRC8 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Lrrc40Q9CRC8 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Lrrc40Q9CRC8 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Lrrc40Q9CRC8 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lrrc40Q9CRC8 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lrrc40Q9CRC8 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lrrc40Q9CRC8 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lrrc40Q9CRC8 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lrrc40Q9CRC8 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms