Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RTRAFQ9CQE8 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Gm8097-201ENSMUST00000117903 829 ntBASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
RTRAFQ9CQE8 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RTRAFQ9CQE8 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
RTRAFQ9CQE8 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
RTRAFQ9CQE8 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.4□□□□□ -0.59
RTRAFQ9CQE8 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
RTRAFQ9CQE8 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
RTRAFQ9CQE8 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
RTRAFQ9CQE8 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
RTRAFQ9CQE8 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
RTRAFQ9CQE8 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
RTRAFQ9CQE8 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
RTRAFQ9CQE8 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
RTRAFQ9CQE8 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms