Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chchd1Q9CQA6 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Chchd1Q9CQA6 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chchd1Q9CQA6 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chchd1Q9CQA6 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chchd1Q9CQA6 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chchd1Q9CQA6 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chchd1Q9CQA6 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chchd1Q9CQA6 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chchd1Q9CQA6 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chchd1Q9CQA6 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chchd1Q9CQA6 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Chchd1Q9CQA6 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Chchd1Q9CQA6 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chchd1Q9CQA6 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chchd1Q9CQA6 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.56□□□□□ -0.72
Chchd1Q9CQA6 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Mir1199-201ENSMUST00000117015 119 ntBASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Gm26571-201ENSMUST00000181399 666 ntBASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 AC112142.1-201ENSMUST00000228796 918 ntBASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Gm45242-201ENSMUST00000210666 2129 ntBASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Chchd1Q9CQA6 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Gm8749-201ENSMUST00000117737 331 ntBASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Gm12020-201ENSMUST00000119030 2042 ntBASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 AC135963.1-201ENSMUST00000211640 717 ntBASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Gm43423-201ENSMUST00000198390 2094 ntBASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms