Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh23Q99PF4 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Cdh23Q99PF4 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh23Q99PF4 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cdh23Q99PF4 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cdh23Q99PF4 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh23Q99PF4 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh23Q99PF4 Gm10146-201ENSMUST00000072739 309 ntBASIC14□□□□□ -0.17
Cdh23Q99PF4 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdh23Q99PF4 Gm13730-201ENSMUST00000121036 1462 ntBASIC14□□□□□ -0.17
Cdh23Q99PF4 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh23Q99PF4 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh23Q99PF4 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh23Q99PF4 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh23Q99PF4 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh23Q99PF4 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14□□□□□ -0.17
Cdh23Q99PF4 Gm27023-201ENSMUST00000182372 285 ntBASIC14□□□□□ -0.17
Cdh23Q99PF4 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdh23Q99PF4 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh23Q99PF4 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh23Q99PF4 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdh23Q99PF4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cdh23Q99PF4 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdh23Q99PF4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh23Q99PF4 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh23Q99PF4 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdh23Q99PF4 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdh23Q99PF4 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cdh23Q99PF4 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh23Q99PF4 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh23Q99PF4 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdh23Q99PF4 Gm8546-201ENSMUST00000178288 1264 ntBASIC14□□□□□ -0.17
Cdh23Q99PF4 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14□□□□□ -0.17
Cdh23Q99PF4 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cdh23Q99PF4 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdh23Q99PF4 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh23Q99PF4 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh23Q99PF4 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdh23Q99PF4 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Gm11331-201ENSMUST00000119764 288 ntBASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Gm13316-201ENSMUST00000140537 691 ntBASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh23Q99PF4 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh23Q99PF4 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.99□□□□□ -0.17
Cdh23Q99PF4 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh23Q99PF4 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Gm14350-201ENSMUST00000116642 640 ntBASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Gm13813-201ENSMUST00000120998 787 ntBASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms