Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col25a1Q99MQ5 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col25a1Q99MQ5 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col25a1Q99MQ5 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col25a1Q99MQ5 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Gm33320-201ENSMUST00000192232 530 ntBASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Gm10109-202ENSMUST00000206890 1211 ntBASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col25a1Q99MQ5 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 Gm43133-201ENSMUST00000197472 463 ntBASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 Gm38671-201ENSMUST00000200573 130 ntBASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 Gm17795-201ENSMUST00000214505 757 ntBASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Col25a1Q99MQ5 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Col25a1Q99MQ5 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.49□□□□□ -0.09
Col25a1Q99MQ5 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col25a1Q99MQ5 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col25a1Q99MQ5 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.49□□□□□ -0.09
Col25a1Q99MQ5 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col25a1Q99MQ5 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.49□□□□□ -0.09
Col25a1Q99MQ5 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col25a1Q99MQ5 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col25a1Q99MQ5 Gm13047-201ENSMUST00000117116 815 ntBASIC14.49□□□□□ -0.09
Col25a1Q99MQ5 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.49□□□□□ -0.09
Col25a1Q99MQ5 Gm4909-201ENSMUST00000118749 794 ntBASIC14.49□□□□□ -0.09
Col25a1Q99MQ5 AC141438.2-201ENSMUST00000215068 271 ntBASIC14.49□□□□□ -0.09
Col25a1Q99MQ5 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Col25a1Q99MQ5 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col25a1Q99MQ5 AC135114.1-201ENSMUST00000228682 270 ntBASIC14.49□□□□□ -0.09
Col25a1Q99MQ5 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Col25a1Q99MQ5 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col25a1Q99MQ5 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col25a1Q99MQ5 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col25a1Q99MQ5 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col25a1Q99MQ5 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col25a1Q99MQ5 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col25a1Q99MQ5 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Col25a1Q99MQ5 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col25a1Q99MQ5 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms