Protein–RNA interactions for Protein: Q99ME3

Sncaip, Synphilin-1, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaipQ99ME3 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SncaipQ99ME3 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.53□□□□□ -0.08
SncaipQ99ME3 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SncaipQ99ME3 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SncaipQ99ME3 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SncaipQ99ME3 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.53□□□□□ -0.08
SncaipQ99ME3 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SncaipQ99ME3 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SncaipQ99ME3 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SncaipQ99ME3 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SncaipQ99ME3 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SncaipQ99ME3 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SncaipQ99ME3 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.53□□□□□ -0.08
SncaipQ99ME3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.53□□□□□ -0.08
SncaipQ99ME3 Gm27622-201ENSMUST00000183779 60 ntBASIC14.53□□□□□ -0.08
SncaipQ99ME3 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SncaipQ99ME3 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SncaipQ99ME3 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SncaipQ99ME3 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SncaipQ99ME3 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SncaipQ99ME3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SncaipQ99ME3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
SncaipQ99ME3 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SncaipQ99ME3 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SncaipQ99ME3 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SncaipQ99ME3 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SncaipQ99ME3 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SncaipQ99ME3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SncaipQ99ME3 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SncaipQ99ME3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.53□□□□□ -0.08
SncaipQ99ME3 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.52□□□□□ -0.08
SncaipQ99ME3 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SncaipQ99ME3 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SncaipQ99ME3 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SncaipQ99ME3 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SncaipQ99ME3 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SncaipQ99ME3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SncaipQ99ME3 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
SncaipQ99ME3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
SncaipQ99ME3 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SncaipQ99ME3 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SncaipQ99ME3 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SncaipQ99ME3 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.52□□□□□ -0.08
SncaipQ99ME3 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SncaipQ99ME3 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SncaipQ99ME3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SncaipQ99ME3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SncaipQ99ME3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.52□□□□□ -0.09
SncaipQ99ME3 Gm27533-201ENSMUST00000183800 152 ntBASIC14.52□□□□□ -0.09
SncaipQ99ME3 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.52□□□□□ -0.09
SncaipQ99ME3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.52□□□□□ -0.09
SncaipQ99ME3 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.52□□□□□ -0.09
SncaipQ99ME3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SncaipQ99ME3 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SncaipQ99ME3 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SncaipQ99ME3 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SncaipQ99ME3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SncaipQ99ME3 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SncaipQ99ME3 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SncaipQ99ME3 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SncaipQ99ME3 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.52□□□□□ -0.09
SncaipQ99ME3 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SncaipQ99ME3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SncaipQ99ME3 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SncaipQ99ME3 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SncaipQ99ME3 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SncaipQ99ME3 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SncaipQ99ME3 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
SncaipQ99ME3 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SncaipQ99ME3 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SncaipQ99ME3 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SncaipQ99ME3 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SncaipQ99ME3 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SncaipQ99ME3 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.51□□□□□ -0.09
SncaipQ99ME3 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SncaipQ99ME3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SncaipQ99ME3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.51□□□□□ -0.09
SncaipQ99ME3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SncaipQ99ME3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SncaipQ99ME3 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.51□□□□□ -0.09
SncaipQ99ME3 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
SncaipQ99ME3 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SncaipQ99ME3 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.51□□□□□ -0.09
SncaipQ99ME3 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.51□□□□□ -0.09
SncaipQ99ME3 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.51□□□□□ -0.09
SncaipQ99ME3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SncaipQ99ME3 AA543401-201ENSMUST00000164248 1269 ntBASIC14.51□□□□□ -0.09
SncaipQ99ME3 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SncaipQ99ME3 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SncaipQ99ME3 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.51□□□□□ -0.09
SncaipQ99ME3 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.51□□□□□ -0.09
SncaipQ99ME3 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
SncaipQ99ME3 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SncaipQ99ME3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SncaipQ99ME3 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.51□□□□□ -0.09
SncaipQ99ME3 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SncaipQ99ME3 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SncaipQ99ME3 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
SncaipQ99ME3 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SncaipQ99ME3 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms