Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Gm13223-201ENSMUST00000118609 747 ntBASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Gm25144-201ENSMUST00000179561 110 ntBASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Gm25352-201ENSMUST00000179815 110 ntBASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Gm27618-201ENSMUST00000183671 60 ntBASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tlr3Q99MB1 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tlr3Q99MB1 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.08■□□□□ 0.01
Tlr3Q99MB1 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tlr3Q99MB1 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Tlr3Q99MB1 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tlr3Q99MB1 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tlr3Q99MB1 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.08■□□□□ 0
Tlr3Q99MB1 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tlr3Q99MB1 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Tlr3Q99MB1 Gm13453-201ENSMUST00000118708 357 ntBASIC15.08■□□□□ 0
Tlr3Q99MB1 Mir1897-201ENSMUST00000122581 272 ntBASIC15.08■□□□□ 0
Tlr3Q99MB1 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Tlr3Q99MB1 Gm27533-201ENSMUST00000183800 152 ntBASIC15.08■□□□□ 0
Tlr3Q99MB1 Gm27989-201ENSMUST00000184721 107 ntBASIC15.08■□□□□ 0
Tlr3Q99MB1 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.08■□□□□ 0
Tlr3Q99MB1 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tlr3Q99MB1 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.08■□□□□ 0
Tlr3Q99MB1 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tlr3Q99MB1 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Tlr3Q99MB1 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tlr3Q99MB1 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15.08■□□□□ 0
Tlr3Q99MB1 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tlr3Q99MB1 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tlr3Q99MB1 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Tlr3Q99MB1 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Tlr3Q99MB1 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Tlr3Q99MB1 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tlr3Q99MB1 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.08■□□□□ 0
Tlr3Q99MB1 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.08■□□□□ 0
Tlr3Q99MB1 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tlr3Q99MB1 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tlr3Q99MB1 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tlr3Q99MB1 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Tlr3Q99MB1 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tlr3Q99MB1 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tlr3Q99MB1 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tlr3Q99MB1 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tlr3Q99MB1 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
Tlr3Q99MB1 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Tlr3Q99MB1 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Tlr3Q99MB1 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tlr3Q99MB1 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Tlr3Q99MB1 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tlr3Q99MB1 Gm15653-201ENSMUST00000119247 907 ntBASIC15.07■□□□□ 0
Tlr3Q99MB1 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.07■□□□□ 0
Tlr3Q99MB1 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Tlr3Q99MB1 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tlr3Q99MB1 Gm6916-202ENSMUST00000205523 195 ntBASIC15.07■□□□□ 0
Tlr3Q99MB1 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.07■□□□□ 0
Tlr3Q99MB1 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.07■□□□□ 0
Tlr3Q99MB1 Shd-206ENSMUST00000225145 998 ntBASIC15.07■□□□□ 0
Tlr3Q99MB1 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.07■□□□□ 0
Tlr3Q99MB1 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tlr3Q99MB1 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tlr3Q99MB1 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tlr3Q99MB1 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.07■□□□□ 0
Tlr3Q99MB1 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tlr3Q99MB1 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.07■□□□□ 0
Tlr3Q99MB1 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tlr3Q99MB1 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Tlr3Q99MB1 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Tlr3Q99MB1 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Tlr3Q99MB1 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.07■□□□□ 0
Tlr3Q99MB1 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tlr3Q99MB1 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Tlr3Q99MB1 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tlr3Q99MB1 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tlr3Q99MB1 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Tlr3Q99MB1 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tlr3Q99MB1 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tlr3Q99MB1 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms