Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RtcbQ99LF4 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC17.24■□□□□ 0.35
RtcbQ99LF4 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RtcbQ99LF4 Gm43118-201ENSMUST00000199149 775 ntBASIC17.24■□□□□ 0.35
RtcbQ99LF4 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC17.24■□□□□ 0.35
RtcbQ99LF4 Gm18056-201ENSMUST00000207670 568 ntBASIC17.24■□□□□ 0.35
RtcbQ99LF4 Gm18061-201ENSMUST00000208350 562 ntBASIC17.24■□□□□ 0.35
RtcbQ99LF4 Gm18063-201ENSMUST00000208529 568 ntBASIC17.24■□□□□ 0.35
RtcbQ99LF4 Gm18052-201ENSMUST00000208750 559 ntBASIC17.24■□□□□ 0.35
RtcbQ99LF4 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC17.24■□□□□ 0.35
RtcbQ99LF4 Itm2b-204ENSMUST00000228637 783 ntBASIC17.24■□□□□ 0.35
RtcbQ99LF4 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RtcbQ99LF4 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RtcbQ99LF4 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
RtcbQ99LF4 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC17.24■□□□□ 0.35
RtcbQ99LF4 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.24■□□□□ 0.35
RtcbQ99LF4 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.24■□□□□ 0.35
RtcbQ99LF4 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RtcbQ99LF4 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RtcbQ99LF4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RtcbQ99LF4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RtcbQ99LF4 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RtcbQ99LF4 AC115735.4-201ENSMUST00000227460 1944 ntBASIC17.23■□□□□ 0.35
RtcbQ99LF4 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RtcbQ99LF4 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RtcbQ99LF4 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RtcbQ99LF4 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RtcbQ99LF4 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RtcbQ99LF4 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RtcbQ99LF4 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RtcbQ99LF4 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RtcbQ99LF4 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RtcbQ99LF4 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RtcbQ99LF4 AC159747.1-201ENSMUST00000219903 265 ntBASIC17.23■□□□□ 0.35
RtcbQ99LF4 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RtcbQ99LF4 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RtcbQ99LF4 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RtcbQ99LF4 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RtcbQ99LF4 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RtcbQ99LF4 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RtcbQ99LF4 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RtcbQ99LF4 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RtcbQ99LF4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RtcbQ99LF4 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RtcbQ99LF4 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RtcbQ99LF4 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RtcbQ99LF4 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RtcbQ99LF4 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RtcbQ99LF4 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RtcbQ99LF4 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RtcbQ99LF4 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
RtcbQ99LF4 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RtcbQ99LF4 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RtcbQ99LF4 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
RtcbQ99LF4 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RtcbQ99LF4 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC17.22■□□□□ 0.35
RtcbQ99LF4 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC17.22■□□□□ 0.35
RtcbQ99LF4 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RtcbQ99LF4 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RtcbQ99LF4 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RtcbQ99LF4 Gm18934-201ENSMUST00000216671 1044 ntBASIC17.22■□□□□ 0.35
RtcbQ99LF4 AC140406.1-201ENSMUST00000226481 465 ntBASIC17.22■□□□□ 0.35
RtcbQ99LF4 CT030704.2-201ENSMUST00000228887 494 ntBASIC17.22■□□□□ 0.35
RtcbQ99LF4 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RtcbQ99LF4 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RtcbQ99LF4 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RtcbQ99LF4 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
RtcbQ99LF4 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.22■□□□□ 0.35
RtcbQ99LF4 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RtcbQ99LF4 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RtcbQ99LF4 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RtcbQ99LF4 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RtcbQ99LF4 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.22■□□□□ 0.35
RtcbQ99LF4 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RtcbQ99LF4 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RtcbQ99LF4 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.21■□□□□ 0.35
RtcbQ99LF4 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.21■□□□□ 0.35
RtcbQ99LF4 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RtcbQ99LF4 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RtcbQ99LF4 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RtcbQ99LF4 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RtcbQ99LF4 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RtcbQ99LF4 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.21■□□□□ 0.35
RtcbQ99LF4 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RtcbQ99LF4 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RtcbQ99LF4 AC121801.1-201ENSMUST00000225363 1899 ntBASIC17.21■□□□□ 0.35
RtcbQ99LF4 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RtcbQ99LF4 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RtcbQ99LF4 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC17.21■□□□□ 0.35
RtcbQ99LF4 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RtcbQ99LF4 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
RtcbQ99LF4 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC17.21■□□□□ 0.35
RtcbQ99LF4 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC17.21■□□□□ 0.35
RtcbQ99LF4 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC17.21■□□□□ 0.35
RtcbQ99LF4 Gm42627-201ENSMUST00000197347 224 ntBASIC17.21■□□□□ 0.35
RtcbQ99LF4 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RtcbQ99LF4 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RtcbQ99LF4 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RtcbQ99LF4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
RtcbQ99LF4 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms