Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Gm13385-201ENSMUST00000121089 220 ntBASIC16.13■□□□□ 0.17
Rfc4Q99J62 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Gm29649-201ENSMUST00000185649 419 ntBASIC16.13■□□□□ 0.17
Rfc4Q99J62 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfc4Q99J62 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.13■□□□□ 0.17
Rfc4Q99J62 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.12■□□□□ 0.17
Rfc4Q99J62 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rfc4Q99J62 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rfc4Q99J62 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Rfc4Q99J62 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rfc4Q99J62 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Rfc4Q99J62 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rfc4Q99J62 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rfc4Q99J62 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Rfc4Q99J62 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
Rfc4Q99J62 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Rfc4Q99J62 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.12■□□□□ 0.17
Rfc4Q99J62 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.12■□□□□ 0.17
Rfc4Q99J62 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC16.12■□□□□ 0.17
Rfc4Q99J62 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC16.12■□□□□ 0.17
Rfc4Q99J62 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rfc4Q99J62 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rfc4Q99J62 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rfc4Q99J62 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rfc4Q99J62 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rfc4Q99J62 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rfc4Q99J62 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rfc4Q99J62 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rfc4Q99J62 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rfc4Q99J62 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfc4Q99J62 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rfc4Q99J62 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfc4Q99J62 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rfc4Q99J62 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rfc4Q99J62 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Rfc4Q99J62 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.11■□□□□ 0.17
Rfc4Q99J62 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rfc4Q99J62 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rfc4Q99J62 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfc4Q99J62 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfc4Q99J62 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.11■□□□□ 0.17
Rfc4Q99J62 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfc4Q99J62 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.11■□□□□ 0.17
Rfc4Q99J62 Gm8927-201ENSMUST00000181978 981 ntBASIC16.11■□□□□ 0.17
Rfc4Q99J62 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
Rfc4Q99J62 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC16.11■□□□□ 0.17
Rfc4Q99J62 Gm9299-201ENSMUST00000206392 1140 ntBASIC16.11■□□□□ 0.17
Rfc4Q99J62 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfc4Q99J62 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfc4Q99J62 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rfc4Q99J62 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rfc4Q99J62 Gm3222-201ENSMUST00000071282 990 ntBASIC16.11■□□□□ 0.17
Rfc4Q99J62 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.11■□□□□ 0.17
Rfc4Q99J62 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rfc4Q99J62 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfc4Q99J62 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfc4Q99J62 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rfc4Q99J62 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Rfc4Q99J62 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfc4Q99J62 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rfc4Q99J62 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Rfc4Q99J62 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rfc4Q99J62 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Rfc4Q99J62 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rfc4Q99J62 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.1■□□□□ 0.17
Rfc4Q99J62 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc4Q99J62 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Rfc4Q99J62 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc4Q99J62 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc4Q99J62 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms